Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00688 ATGGATAGCATGGATATGGAATTGCGTGAGGCGATTGGAAGCATTGCATTTGCACTCGGTGCTGCATCTTCCGCATCTATGGAAACCAAATCCAGCCGTGCTCGAGCAAGCTTTCAATGGGGTGGAAGTATCTTTGGCTTAATTTTGCTGATCTTAAATGGACTTGGGCGCAGCTCGCGCACACAGAGTAACCTTTTAGTACTATACCTCTTCACAAGTTTCCCAGGAGTATTGTTCAAAATTGTAAGGGGAGAGTTTGGTTATTGGGTTGCTTTCCTTGCAATTGCAGCGAACCTCTTTTTTCCTGAAACTTTTCCAGCTTCTCGTTTTCTCGTGTTTGTCGTCACTCCCAATTGGATTGCCGATGGACTGCGTGATAGCATGTTTGGTGGAGttttttgtcttataattGCGATCCTACTTGTTATAACAGAGGTTCGAGAACTTGGAGGTCTGGGTCACTGTCGGTGTAATTTCCATTGCTTTGCCTATGGTTTTTCTAtagctttcatttttttcttcacaataCTCTATCTCTGCTTAGGAACTTGGTA 554 0.417 MDSMDMELREAIGSIAFALGAASSASMETKSSRARASFQWGGSIFGLILLILNGLGRSSRTQSNLLVLYLFTSFPGVLFKIVRGEFGYWVAFLAIAANLFFPETFPASRFLVFVVTPNWIADGLRDSMFGGVFCLIIAILLVITEVRELGGLGHCRCNFHCFAYGFSIAFIFFFTILYLCLGTW 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00688 184 Pfam Cold acclimation protein WCOR413 26 154 IPR008892 GO:0016021
Bva08g00688 184 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 4-LIKE 22 184 - -
Bva08g00688 184 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 22 184 IPR008892 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00688 Bva-Chr8 3561305 3564149 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00688 - - qlo:115995461 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00688 08 3561305 3564149 Bva08g00688 08 3561305 3564149 ECH