Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00635 ATGAATGGCCCAGAAAGATCCACTAAGGCCCAGAACCTTAAACCCCGCATCTCAAAAACCTCGGAGGGTCCTCGAACCCCGACGAGGGGTTTGCTCTTGGACGCCAAATTTGCGGCCAAAACGATCATGGCGACACGGTGGCGCTCCATTGCTGGCCACTTTAAAGCAGTGACGAACGGCTGTTGGGATTCGTCGTTCTTATTGAGATTTCAATATGCTTCTTACCACACGATCCAGGCCATCCCTAGAGAGTGTACCGGCAGTAGAGTCTCCGCAAGAGATAGATTGCAAGATAGAATACCTGCCGTCGTTTTCCACCAGAATATTCTCAAAAAAGACCCTGGGGTCCGATCACCATCGAGGAAGCAGTTGATTACCACTGAGTGGAAGCAGATTAAGGCGATACTCAAGTCCGTGGAACTTCCTTTCATCTACTCGACCCGGTTCCCTCTCCAGATCCGTGCTGGCTCCGGATCTTCTCATCTACTGGAATCCGGAAATGTCCTACCCATCaagGTTCATAGGGATAAAGAGAGCGGGAAAATCCTCAATATGGTGTTTGTTTGGGCTGAAGACGGGCAGGAGTTGAAGGTAGACGTGCCTGTTGTTTTCAAAGGCGAAGATGCGTGTCCTGGTCTCCTGaaagGGGGCTATCTGAACCGGATTAGAACTAGTTTAAGATATCTTTCTCCAGCTGAGCACATTCCTACAAAAATTGAGGTGGACGTGAGCAATCTAGATGTTGGAGATAGGGTGTTCATGCGTGATATAGAGCTTCATCCATCTTTGAAGCTTCTGAGTAAGAATGAAAACATGCCCATATGTAAAATAGTTCCGACAAGTGTGAGAAACCAAGAACCTGCTGAGTA 869 0.4787 MNGPERSTKAQNLKPRISKTSEGPRTPTRGLLLDAKFAAKTIMATRWRSIAGHFKAVTNGCWDSSFLLRFQYASYHTIQAIPRECTGSRVSARDRLQDRIPAVVFHQNILKKDPGVRSPSRKQLITTEWKQIKAILKSVELPFIYSTRFPLQIRAGSGSSHLLESGNVLPIKVHRDKESGKILNMVFVWAEDGQELKVDVPVVFKGEDACPGLLKGGYLNRIRTSLRYLSPAEHIPTKIEVDVSNLDVGDRVFMRDIELHPSLKLLSKNENMPICKIVPTSVRNQEPAE 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00635 289 CDD Ribosomal_L25_TL5_CTC 77 187 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Bva08g00635 289 MobiDBLite consensus disorder prediction 1 25 - -
Bva08g00635 289 Gene3D Ribosomal protein L25, beta domain 193 285 IPR037121 -
Bva08g00635 289 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 43 288 - -
Bva08g00635 289 Pfam Ribosomal protein TL5, C-terminal domain 196 280 IPR020057 -
Bva08g00635 289 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 43 288 - -
Bva08g00635 289 MobiDBLite consensus disorder prediction 1 29 - -
Bva08g00635 289 SUPERFAMILY Ribosomal protein L25-like 75 286 IPR011035 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00635 Bva-Chr8 3304969 3307745 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00635 K02897 - gmx:100802599 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00635 08 3304969 3307745 Bva08g00635 08 3304969 3307745 ECH