Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00456 ATGTGTATTGCTTCGTGTGTTGCCAAGTCGGTGCCATTGGAGGGAATGGGGAAGGTCAAGTTTAAGTCTTTGCGAGAGCTCTATGGTAGAACTCAGGAAATCTCGTTACCAACCGAGCCTTCCATGtttcaaatggaagaaaagttGAGGACATCCAATGTGTGTGTCACACAATGTTCAACGGATATGCATTTTGAACAAGTGGCATCAATAGTTGGTGGAAGGACTGGTGACTCTACTGATAAAGCCTCTGATGGGAAAAGAGACAGTGATTGCCCTTCTACTCATAATTTTGTGTTCTCTTCTTCATTGAGACAGTGTTCGAGCAGTGCGGATTCGCAAGAACCTGGTGGACAATCTTGTAATTCTCCCAAAGACATGATAAATTTTGATGATCAAAGATTCCCAGCTAAACTTGAGAAGGGTAAAGAATTTGAATTCCTGGGAGATAACATCTCATGCATCAGCAAATCAGACAGCACAAATTTGGCGATAGgtaatcaaaataatgatgCTGAAAAGAAGAATGTATCTTCCAGTTTAGCTTCAGTTGATAGCCTGCCTACAGTTGGAAATGATGTAAATGATAAACCTGATCGCCTTTATCTGGCTGGTTATCATTTCGACAAATCTAATAGCAGTCATTGTGGgattcaaaattttaccaaAGAATCTCCACCAACAGCAGTAAGTCTTCCAAACAGATCTGACCAATCAATTTCTTCTGTAATTTCTTTGGAGCGAGATCCTTCTGAATTCTCAGAGGAGCAGGTTGTGTCATCACTAGCAAGAGCAGTGACAAATGGGCTTAATAGTCAGATAGAAGGTATTTACAACTCTGCTACGTTTATGAAAGCTGATCatcaattgaattttgaagattcAGCTATTGAAACTGAAAATCATTCATACTGCGAAGTGCATCTCCAAAAGTCTGTTGCTTTGGTGGTGAATAACAGTGTGCGAGAACCATGGCAATCTCAACTAGTGGACCCAAGCGGGGTATCGCATCTAAAGGATGATGAgGCTAGAGTTTGCGATATCTGCGGGGATGTAGGGCGGGAGCATCTACTTGCTATTTGTAGCAAGTGTACTGATGGTGCTGAAcacatTTATTGTATGCGTATTAAGCTTGAGAAAGTTCCTGAAAGTGACTGGGTATGTGAAGAGTGCCTCCTGATGACAGACTATGGAAAACCAAAGCAAAATACACTTGAAGAGACGGTTAGAATATCAAAAGGCTGTTTAGAATGCCAAATATCTAGAAAttcaataaatcataaatctaGTAGTGATGGattcaattttaaatcctCGGGTTCTACCATAAGTGGGACAAATGATCGAAGTTCTACTTCTCAATTATCCTCTAAGAGACCTGCCTCTGCTTTAGAGGTGCAGTCTGTGAAAGAAGCAAGGGCTCTTGGAATGAGTCCTGTATCCCCCATGTCATCCAAAAGTTGCACAGCCACCCTATTTTGTGAAGACTTCTCTTGCAAGAACTTAAAGAAGGGAAAAGTGGAAGATGCCACTTCTATTACTTCTGCGCTCCAATTTTCTACCACTTCTCAGGAGAAAGTCGGGAATCCTTGTGCTTGTGGTTATAAGAGAGATGCAGGCAGCTCAGAAGCTCGgtcagagaagaaaagaaggattCTTGATACAACAGTCGTATCCTCTAGAGCGTCCAAACCAATCAAGCATTCTTTACTAAATAGGGAGCCTCAATTCAAGAATTTGGAGGATGAAAAAATGGAGGATGTTGGTGACGTTACTTCTCTGAAGAAAAATTCCAATATTTTGCAGGAAAAAACTGAGTTACATGCTATTTTACGTGATAAATTACCTAAATTGGGCACGCATATTGGGTTATCACAAGATAAAGgCTCTATGTATGAGATGAGATCATTTTACAGTACTGacttgaaattgaaaggaCAGCAACCAAGGGTTGAATGTTTGCAAAAGCAGAAGGTTGCGAGAAATTCAGCTTTTcatgatgataaaattgaaaaagattcTAGCAAGAAAGGTAATGCAAACGCTACTGGTTCTAAGGTTTGCCCAAGAAAGGATTCTCACTCCGATGCCATGAAGAAATCCAGCCATGCAGAAGAACTGAAGACAGCTAAAGAGAACGATACTTCTGAGCTATGTGATCCTGTAATAAGCTCACAAGCTTCTGATTCTGATGTTACTGCAGTAGAAGTTGAAAAACAAGCCATATCTTGCAAAAAAGTTATCATTTCAGGACCAAACTGTCATAAACTTGATGTTGTTGAAAGTTGTAGAAAACCGGATTATAGGTTAAAATCAACCAGCAATATCATGCATGAAGATTTGAATTGTCCAAATGAAgaggaaataaataagagcTGGCAAGCTGAGTGTCCTGCAGAAGCTACCTCTGATAAGAGAACAGATAAAGTATGCATTGATTTAGCCTTCAATGAAATGCCCAAACTAAGAAAGTTGACCCAGTTTGATATGACAATTACTTCTGCAACTAATGCCATTCCAGAGGATCATTACATATGGCTAGGCAAATTTCAGATACACAGCCGTGAAGGACTTGCAAGTTCTTTTGATGGGATTCAATCACACCTATCAACTAAGGCATCACCTAAAGTTCTTGAAGTGGTGGACCAGTTTACTGAGATTCTTTTGTTAGAGGAACTGCCTCGCTTGAGCATTTGGCCGTCTCAGTTTGTAGAGAGGCCTGTTACAGAAGACAATATTGCTCTCTACTTCTTTGCAAAAGATCTTAATAGCCATACAACATCCTATACAAGACTGTTGAATTACATGAAAAAGAACGATTTGGCTCTCAGAGGGAATTTCGATGGGGTTGAACTAgtaattttttcatcaaatgtTCTGCCCGAGAACTTAGAGTCTTGGAATACATCGTCGTACTTGTGGGGTGTATTCAGAGGACAGAAGGTCCGTAACTCAGCTGACACAACAGGGTCAAATTCTCAAAGAAATGAAAATAGAGATGGTGGGAGAAGGTGGACACTGGATCTCAATGTTTGTCCTCCAGATGAAGAAGACACAGTAAAAACTCTTGATGGTGGCAGATGCTTGGATATCAATCCTTGCTTcaatgaagatgatgaatttGATCCTACCGGTACAATATATCTAGGACACGGACCTCTGCTTGGAGGAGATGGTTCTAGTTCTGGCTTTTCTGATCAGAGGCAAGCACATCCATATGTAGGAGAGAACAAGTCTGAGCCCGAGGTTCTTGACCTTGAGCTTTCTCTGTGGCCTCAAAATGCAGTGCCTGGGGAGATGGAGGTTGACACAGAGCTCTCTGTGTGGTCTCAAAATGCAGTGCCCAGGGAGACGAAGCTTTA 3362 0.3888 MCIASCVAKSVPLEGMGKVKFKSLRELYGRTQEISLPTEPSMFQMEEKLRTSNVCVTQCSTDMHFEQVASIVGGRTGDSTDKASDGKRDSDCPSTHNFVFSSSLRQCSSSADSQEPGGQSCNSPKDMINFDDQRFPAKLEKGKEFEFLGDNISCISKSDSTNLAIGNQNNDAEKKNVSSSLASVDSLPTVGNDVNDKPDRLYLAGYHFDKSNSSHCGIQNFTKESPPTARDPSEFSEEQVVSSLARAVTNGLNSQIEGIYNSATFMKADHQLNFEDSAIETENHSYCEVHLQKSVALVVNNSVREPWQSQLVDPSGVSHLKDDEARVCDICGDVGREHLLAICSKCTDGAEHIYCMRIKLEKVPESDWVCEECLLMTDYGKPKQNTLEETVRISKGCLECQISRNSINHKSSSDGFNFKSSGSTISGTNDRSSTSQLSSKRPASALEVQSVKEARALGMSPVSPMSSKSCTATLFCEDFSCKNLKKGKVEDATSITSALQFSTTSQEKVGNPCACGYKRDAGSSEARSEKKRRILDTTVVSSRASKPIKHSLLNREPQFKNLEDEKMEDVGDVTSLKKNSNILQEKTELHAILRDKLPKLGTHIGLSQDKGSMYEMRSFYSTDLKLKGQQPRVECLQKQKVARNSAFHDDKIEKDSSKKGNANATGSKVCPRKDSHSDAMKKSSHAEELKTAKENDTSELCDPVISSQASDSDVTAVEVEKQAISCKKVIISGPNCHKLDVVESCRKPDYRLKSTSNIMHEDLNCPNEEEINKSWQAECPAEATSDKRTDKVCIDLAFNEMPKLRKLTQFDMTITSATNAIPEDHYIWLGKFQIHSREGLASSFDGIQSHLSTKASPKVLEVVDQFTEILLLEELPRLSIWPSQFVERPVTEDNIALYFFAKDLNSHTTSYTRLLNYMKKNDLALRGNFDGVELVIFSSNVLPENLESWNTSSYLWGVFRGQKVRNSADTTGSNSQRNENRDGGRRWTLDLNVCPPDEEDTVKTLDGGRCLDINPCFNEDDEFDPTGTIYLGHGPLLGGDGSSSGFSDQRQAHPYVGENKSEPEVLDLELSLWPQNAVPGEMEVDTELSVWSQNAVPRETKL 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00456 1102 MobiDBLite consensus disorder prediction 671 697 - -
Bva08g00456 1102 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 265 386 IPR013083 -
Bva08g00456 1102 SMART PHD_3 327 374 IPR001965 -
Bva08g00456 1102 MobiDBLite consensus disorder prediction 108 129 - -
Bva08g00456 1102 MobiDBLite consensus disorder prediction 108 127 - -
Bva08g00456 1102 MobiDBLite consensus disorder prediction 422 446 - -
Bva08g00456 1102 MobiDBLite consensus disorder prediction 640 705 - -
Bva08g00456 1102 MobiDBLite consensus disorder prediction 70 93 - -
Bva08g00456 1102 SUPERFAMILY FYVE/PHD zinc finger 315 378 IPR011011 -
Bva08g00456 1102 MobiDBLite consensus disorder prediction 643 658 - -
Bva08g00456 1102 MobiDBLite consensus disorder prediction 966 986 - -
Bva08g00456 1102 MobiDBLite consensus disorder prediction 422 445 - -
Bva08g00456 1102 PANTHER - 124 493 - -
Bva08g00456 1102 PANTHER - 504 972 - -
Bva08g00456 1102 PANTHER - 124 493 - -
Bva08g00456 1102 PANTHER - 504 972 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00456 Bva-Chr8 2342980 2348493 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00456 - - aprc:113860076 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00456 08 2342980 2348493 Bva08g00456 08 2342980 2348493 ECH