Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00454 ATGGCTTCGGCGAGATGCGTGAAAGAAACATTAGGCGAGCTGAAAAGGGAAGGTTTTGTGCCCTTTCTTTCGAAGCTTATTGGGGAATCTAAATACGTCCAGAACAATCCCCCTGAGCTGATACCAGAAGAAGATAGAGTGGTCAAACATGTGTTGGATTCCCTCCTCCCCTTGAGCACTACCACAGGTGGAGGACCCTTGATTGTTAACCATGTCACCTATTTCCCTGGAAGAGGGAACCTTATTGTCGAGTACCCTGGAACTGTCCCAGGAAAAATCTTGTCTTTCGTTGGATGTCACATGGACGTCGTCACTGCCGATCCCAATGATTGGGATTTTGATCCATTTACTTTGAGCATTGACGGGGATAAACTCCGGGGTCGTGGAACTACTGATTGTTTGGGACATGTTGCACTTGTAGCTGAACTCATGCGGAAGCTTGGGGAAACAAAGCCAAAATTGAAGTCAACTGTTGTTGCTGTTTTTATAGCCAACGAAGAGAATTCTGCCATATCTGGCGTCGGTGTAGATGCACTTGTAAAAGACGGTTGGCTCAACAAGTTAAAGGAAGGTCCTCTGTTTTGGATTGACACAGCAGATAAACAGCCTTGCATAGGCACTGGTGGTATGATACCTTGGAAACTTCACGTCACAGGGAAACTATTTCACAGTGGATTAGCTCATAAGGCCATAAATCCACTGGAGCTAGCCATGGAAGCACTAAAGGATATCCAATCAAGATTTTACACAGACTTCCCACCACATCCTCAGGAACAGGTCTATGGATTTGCAACACCTTCGACCATGAAACCAACCCAATGGCAGTATCCTGGAGGTGGAATCAATCAAATTCCAGCTGAATGTACTATTTCGGGAGATGTCAGGTTAACTCCATTCTACAATGTAAAGGATGTTATGAAGAAGCTACAAgaatatgtggatgatattaatgaaaacatacaGAAGCTAGAAACACGGGGGCCCGTGTCGAAATATGTCCTTCCCGACGAGAACTTGAGGGGAAGTCTGACTCTAACTTTTGATGAGGCAATGTCTGGAGTTGCTTGTGATATTAAGTCTAAAGGTTTTAAAGTATTATGTAAAGCCACTGAGGAAGTAGTTGGGCATGTAAAGCCTTACTCAATTACCGGGAGTTTGCCACTCATTCGAGAACTGCAGGATGAAGGTTTTGATGTGCAAACTTCTGGCTACGGTTTGATGGCAACGTACCATGCCAAGAATGAATACTGCCTTTTCTCAGATATGTCACAGGGATATCGGGTGTTTGTCAGCATCATTGCCCAACTGGAGGATTCAGAATA 1322 0.438 MASARCVKETLGELKREGFVPFLSKLIGESKYVQNNPPELIPEEDRVVKHVLDSLLPLSTTTGGGPLIVNHVTYFPGRGNLIVEYPGTVPGKILSFVGCHMDVVTADPNDWDFDPFTLSIDGDKLRGRGTTDCLGHVALVAELMRKLGETKPKLKSTVVAVFIANEENSAISGVGVDALVKDGWLNKLKEGPLFWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLAHKAINPLELAMEALKDIQSRFYTDFPPHPQEQVYGFATPSTMKPTQWQYPGGGINQIPAECTISGDVRLTPFYNVKDVMKKLQEYVDDINENIQKLETRGPVSKYVLPDENLRGSLTLTFDEAMSGVACDIKSKGFKVLCKATEEVVGHVKPYSITGSLPLIRELQDEGFDVQTSGYGLMATYHAKNEYCLFSDMSQGYRVFVSIIAQLEDSE 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00454 440 CDD M20_ArgE-related 14 436 - -
Bva08g00454 440 PANTHER - 6 438 - -
Bva08g00454 440 Pfam Peptidase family M20/M25/M40 97 434 IPR002933 GO:0016787
Bva08g00454 440 PANTHER ACETYLORNITHINE DEACETYLASE 6 438 - -
Bva08g00454 440 Gene3D - 209 325 - -
Bva08g00454 440 Coils Coil 306 326 - -
Bva08g00454 440 Gene3D Zn peptidases 13 193 - -
Bva08g00454 440 Pfam Peptidase dimerisation domain 205 318 IPR011650 -
Bva08g00454 440 SUPERFAMILY Bacterial exopeptidase dimerisation domain 209 319 IPR036264 -
Bva08g00454 440 SUPERFAMILY Zn-dependent exopeptidases 17 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00454 Bva-Chr8 2333284 2337270 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00454 K01438 - mnt:21406046 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00454 08 2333284 2337270 Bva08g00454 08 2333284 2337270 ECH