LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva08g00439	ATGTCTGCTTTAGCCTTTGCTCCTTCTGTTTACAAACCCCTATTCCCTTTATTCTCAACATCCACAACTTACAAAATCATCGCCAATCGCAAAAGCAGAACCAGAGTCTCTGTCCATTCTTCTCTAACCCCACAGGCCATCTCCTCAGACCCTTTTGTACTCGAACTTGCAGAAACCCTTGAAGACTCTCttccctcttcttcttctcctccatTACCTCTCCTGAAGCTCAGAGAAGCATCTTCTGAATCACTTCTCTCAACTCCATGGCCTTCCCGCAAAGACGAGCCCTTTCGCTTCACGGACATTTCCTTCATCAGGCAATCAGAAATCCGCCCTGTCTCACAGATTCTAGACCCATCTCTCTTGTTGGGCATATCTGTGGATACCCAGTTCCCCTATCTTGCCATCGTCGATGGCCACTTGGTGAAATCAATGTCGAATTTGTCAGAATTGCCAAAAGGGGTTTTTGTTGGTTGCTTGTCAGAGCTCACTTCGACTAGTATAATTGAAGAAGTATCTGATGTAGTCTGTAATTTGGATAGCAAGGACTTGTTTTGGTCCATCAATGGTATTGGGGCTCCGGATTTGACAGTGATCTATGTCCCAGAGGGATGCCGCGTTGAAATTCCGATCCACTTGGCGTATTTTTCAATTGAGGGCGGCAATGAGGGCTCAAAAACAATGTACGTTTCAAATCCAAGAGTGCTTTTGTTGGTGGAAAAGGAAGGAGAGATTGATAtcattgaagaattttctacTACTGATGGCAATAAATGTTATTGGACAAATTCAGCCTTGGAGGTAGTGATTAGAGAAGGTGGAAAAGTTAGGCATTCTTATATTCAGAATCAATCCTTGAGCGCAGCCCATACAAAATGGACCTCAGTCCAGCAGGGATCATCTAGTACATACGAGTTGACAGAGGTAAGCACAGGAGGAAAATTGGGTAGGCACAATCTTCATATCCAACAGTCAGGTCCTGAGACAGTAACTGAGTTATCAACTTTACACTTGTCTGTTGGTGATCAAACACAAGATCTGCACAGCAAACTCGTATTGGACCATCCACGAGGCTATTCCCGTCAACTTCACAAGTGCATTGTGACACATTCACTTGGACAAGCTGTTTTTGATGGCAACATAAAGGTCAACAGGTATGCTCAGCAGACAGATGCAGGACAATTGACAAGAAGCCTTCTACTTGAACCTCGTGCAACCTTAAACGTTAAACCAAATCTCCAAATAGTGGCTGATGATGTCAAGTGCTCGCATGGAGCCGCCATAAGTGATCTCGAAGAAACCCAACTCATGTATTTCCTAGCGCGTGGTATTGACTTAAAGACAGCGAGAAAAGTTCTAATTTTTGCCTTTGGTGGGGAGGTGATAGAAAGGCTACCTTACTCTTCCATTAGAGAGAGAGTACGAAGTCAGATCAAACAATTACTGGATCCACAGCCTAATTG	1466	0.4291	MSALAFAPSVYKPLFPLFSTSTTYKIIANRKSRTRVSVHSSLTPQAISSDPFVLELAETLEDSLPSSSSPPLPLLKLREASSESLLSTPWPSRKDEPFRFTDISFIRQSEIRPVSQILDPSLLLGISVDTQFPYLAIVDGHLVKSMSNLSELPKGVFVGCLSELTSTSIIEEVSDVVCNLDSKDLFWSINGIGAPDLTVIYVPEGCRVEIPIHLAYFSIEGGNEGSKTMYVSNPRVLLLVEKEGEIDIIEEFSTTDGNKCYWTNSALEVVIREGGKVRHSYIQNQSLSAAHTKWTSVQQGSSSTYELTEVSTGGKLGRHNLHIQQSGPETVTELSTLHLSVGDQTQDLHSKLVLDHPRGYSRQLHKCIVTHSLGQAVFDGNIKVNRYAQQTDAGQLTRSLLLEPRATLNVKPNLQIVADDVKCSHGAAISDLEETQLMYFLARGIDLKTARKVLIFAFGGEVIERLPYSSIRERVRSQIKQLLDPQPN	488

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva08g00439	488	TIGRFAM	sufD: FeS assembly protein SufD	196	474	IPR011542	GO:0016226
	Bva08g00439	488	SUPERFAMILY	Stabilizer of iron transporter SufD	70	484	IPR037284	-
	Bva08g00439	488	Pfam	SUF system FeS cluster assembly, SufBD	232	458	IPR000825	GO:0016226
	Bva08g00439	488	Pfam	SufBD protein N-terminal region	64	214	IPR045595	-
	Bva08g00439	488	PANTHER	PROTEIN ABCI7, CHLOROPLASTIC	30	485	IPR011542	GO:0016226

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva08g00439	Bva-Chr8	2253375	2256123	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva08g00439	K09015		-	zju:107416153	647.506