Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00435 ATGGCACTCGGAATGTGGGCTTCTTCTACTGCAAATGCACTCAAAATCTCCTGTGCTTCTTCTTCTAGAGCTCATCTCTTCCCTgctgctttctctctctccagATGCTTCTCCACCgTGCTGGATGGTCTCAAGTATGCAACTTCACACGAATGGGTCAAGCACGAAGGTGCCGTGGCTACAATTGGTATCACCGATCATGCCCAGGACCATCTCGGGGAGGTTGTATATGTGGATCTGCCGGAAAAAGGCACTTCGGTGACGAAGGAGGGCAGCTTCGGAGCAGTTGAAAGTGTTAAAGCAACCAGTGATGTGAATTCTCCAATCTCTGGAGAGGTGGTTGAGGTGAACGCAAAGCTCACCGGAAAACCTGACTTGaTCAACAAAAGCCCGTACGAAGACGGATGGATGATCAAAATAAAGCCTAGCAATCCATCCGAATTAGATTCCTTGATGGGTCCAAAGGAATACACAAAATTTTGCGAGGAAGAAGACGCTGCACATTA 506 0.4585 MALGMWASSTANALKISCASSSRAHLFPAAFSLSRCFSTVLDGLKYATSHEWVKHEGAVATIGITDHAQDHLGEVVYVDLPEKGTSVTKEGSFGAVESVKATSDVNSPISGEVVEVNAKLTGKPDLINKSPYEDGWMIKIKPSNPSELDSLMGPKEYTKFCEEEDAAH 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00435 168 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 84 113 IPR003016 -
Bva08g00435 168 ProSiteProfiles Biotinyl/lipoyl domain profile. 59 141 IPR000089 -
Bva08g00435 168 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 1 168 - -
Bva08g00435 168 CDD GCS_H 46 140 IPR033753 -
Bva08g00435 168 Hamap Glycine cleavage system H protein [gcvH]. 41 162 IPR002930 GO:0005960|GO:0019464
Bva08g00435 168 TIGRFAM gcvH: glycine cleavage system H protein 42 165 IPR017453 GO:0005960|GO:0019464
Bva08g00435 168 Pfam Glycine cleavage H-protein 44 163 IPR033753 -
Bva08g00435 168 SUPERFAMILY Single hybrid motif 40 163 IPR011053 -
Bva08g00435 168 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 1 168 IPR002930 GO:0005960|GO:0019464
Bva08g00435 168 Gene3D - 38 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00435 Bva-Chr8 2233676 2234849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00435 K02437 - qsu:112005463 283.108