Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00425 ATGAAAACCAGAAGGGGAAAGCGCTCGGAGCCCTTTTGGCCTTCCATTGTGATGAAGAAATGGTTAAATATAAAGCCCAAGGCGTATGATTTTAGTGAAGATGAAGTGGATACTGAAACTGAGAGTGAAGATGATGCTGACTCTGACAAAGATTCAAGAACACGCATACGTGAAGATAATCCGCTCAGAACTAAGGGGAACCAGCCCATATTCCCAAGTCAAACATCAGATACTTGTTCTAAGGGCTCTAAGGTGAGACATAGAAGAGGAAAATCAGAAACTCTGCGTGCTCAGTACATAAATACAAAGGAAGTGAGGGTAACAATTGGAACTTGGAATGTTGCTGGAAGACGTCCATGTGAGGATCTTGAGATTGATGACTGGATATGTACCGAAGAGCCAACAGATATTTACATTCTTGGTTTCCAAGAAGTAGTTCCATTGAATGCTGGAAATGTACTGGGAGCGGAAGATAACACACCCATCCCAGAATGGGAGCAAATCATTCGAAGAACTCTAAATGGATCCTCAGATCTTGAATGCAAACACAAAAGCTACAGTGCTCCTCCTTCTCCTGTTTTAAGAAGTTCTTCAGCTGATGATATTCTAGTTGACAATATTGATGCTATTGCTAATTCATTAAATGTAATGGATGAAGAGTATGTAGAAAGTGTTGACAATTCTGAGCTGGAAAAGCATAAAGTGGAAAAAGTAATTGGCATGGGAAAGAATTTGCAGTTGATGAGAATATATAGCTTTGATGCTCGGTCTAATCTTGATTGGCCAGAACGTCCATTAGATGCGATCCCCCAAGTTGTCGCTTCCAGTCCAAAATTACGGAGAGTCTTAAGCAGTTCAGCAAGAATTGGCTTTAACTGGACTGAGAATGCTTCGACATATGGTAGTGGAATGGAACGTTCATACCAAAGCTCCGATAACCTTAACTTGATGTGGAAGCAGCAGCAAGACATGCCTCAAGTAATAGACTCCCTTTCTGATGCATCTGACATTTTATCTGATGAGGAAGATGATACTTTGATTGAATTACCAAAGGAACAAGATGATAATGGAATAGGTATAGGTGTCACGAAGTCACGTCCTAGGTATGTCCGGATTGTCAGCAAGCAGATGGTAGGGATATATGTATCAGTTTGGGTGCAGAGGAAGTTGAGAAGGCGTATCAATAATTTGTCAGTTTCACCTGTTGGAATTGGTCTTATGGGCTACATGGGAAATAAGGGTTCTGTTTCAGTTAGTATGTCTCTCTTCCAGTCACGCTTATGCTTTGTTTGCTCCCATCTCACTTCGGGTCAGAACGATGGGGCTGAACAGAGGCGAAACTCTGATGTTAGTGAAATTCTAAAACGAACCCGCTTCTCATCTGTCTTCGAGGCTGAGAAACCACAAACAATCCCATCTCACGATCAAATTTTCTGGTTCGGTGATTTGAATTACCGAATCAATATGTTGGATGAAGAGGTCAGAAAGCTGGTGGCTTTAAAGAAGTGGGATGAGCTGATGAACAATGATCAGCTGAGCAAAGAACTCCGCAGTGGGCATGTATTTGATGGATGGAAAGAAGGGCTGATAAACTTCCCACCCACTTACAAGTATGAAATAAATTCTGACAGATATATTGGGGAGAACCCaaaagaaggggaaaagaGGAGATCTCCGGCCTGGTGTGATCGTATACTGTGGCTAGGAAAAGGAACAAAGCAACTGTCATATAGGCGTGCAGAGATAAAGCTCTCTGATCATCGACCTGTTAGTTCAATCTTCTCGGTTGAAGTTGAAGTATTAGATCAGAGGAAGCTACAGAGAGCTCTAAATTTCACTAGTGCTGTTGTACACCCAGAGGAGTTCATTACTAGTGCTGTTGTACACCCAGAGGAGTTCCTCGATGAAGATGGGGAATTATACTA 1925 0.4166 MKTRRGKRSEPFWPSIVMKKWLNIKPKAYDFSEDEVDTETESEDDADSDKDSRTRIREDNPLRTKGNQPIFPSQTSDTCSKGSKVRHRRGKSETLRAQYINTKEVRVTIGTWNVAGRRPCEDLEIDDWICTEEPTDIYILGFQEVVPLNAGNVLGAEDNTPIPEWEQIIRRTLNGSSDLECKHKSYSAPPSPVLRSSSADDILVDNIDAIANSLNVMDEEYVESVDNSELEKHKVEKVIGMGKNLQLMRIYSFDARSNLDWPERPLDAIPQVVASSPKLRRVLSSSARIGFNWTENASTYGSGMERSYQSSDNLNLMWKQQQDMPQVIDSLSDASDILSDEEDDTLIELPKEQDDNGIGIGVTKSRPRYVRIVSKQMVGIYVSVWVQRKLRRRINNLSVSPVGIGLMGYMGNKGSVSVSMSLFQSRLCFVCSHLTSGQNDGAEQRRNSDVSEILKRTRFSSVFEAEKPQTIPSHDQIFWFGDLNYRINMLDEEVRKLVALKKWDELMNNDQLSKELRSGHVFDGWKEGLINFPPTYKYEINSDRYIGENPKEGEKRRSPAWCDRILWLGKGTKQLSYRRAEIKLSDHRPVSSIFSVEVEVLDQRKLQRALNFTSAVVHPEEFITSAVVHPEEFLDEDGELY 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00425 641 MobiDBLite consensus disorder prediction 32 91 - -
Bva08g00425 641 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 8 624 IPR045849 GO:0004445|GO:0046855
Bva08g00425 641 SUPERFAMILY DNase I-like 96 615 IPR036691 -
Bva08g00425 641 Gene3D Endonuclease/exonuclease/phosphatase 86 191 IPR036691 -
Bva08g00425 641 MobiDBLite consensus disorder prediction 47 62 - -
Bva08g00425 641 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 8 624 - -
Bva08g00425 641 MobiDBLite consensus disorder prediction 66 80 - -
Bva08g00425 641 Gene3D Endonuclease/exonuclease/phosphatase 308 622 IPR036691 -
Bva08g00425 641 SMART i5p_5 291 602 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00425 Bva-Chr8 2186373 2190742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00425 369 603 Acyl Lipid Metabolism Gene Families AT2G43900 30.325 4.64e-35 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00425 K24221 - ccaj:109800886 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00425 08 2186373 2190742 Bva11g01888 11 16358996 16363803 BWGD