Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00420 TTGTTCTTCCCCACGAAATAAGGTGTGCAGGAGATGGCAGACTTACCAGGTTACTTTCGTTCCTGCTTCAACACAGGGAAACTTGCCTGCTTGGTAATTTTGGTCTCTGGAGGAATTGTCTTGCAAATTTTAGCATGTGTCATGTATAATAATTGGTGGCCAATGCTAACTGCGATAATGTATGTGCTTCTTCCAATGCCTTTGTTGTTGTTTGCGGGGTTAGATGGTGCTTCCTCATTTTCTGAATCGGACAATTGGGTGAATGCAGCTAAGTTCTTGACTGGAGCCTCAGCTGTTGGAAGCATTGCGATACCGGTTATATTAATGCGTGCTGGTGTTATTGGCTGGGGAGCACTTGCAATGGAACTCTCATCCTTCTTTGTGTTTGTATTAGCCATAATGTATTTTATACGGATGACTGATGATAACTATAGAATCCAAAACGTATTACATTATTCCCATcgtattttgtttctttctcttggtGAGCTTCAGTTGTGTTTTATCTTTCAAATTCAGCATCGTCCCCGCGAAACTGAAGAACTTAACAAACTGATGATGACTCTTGACAGAGCTTG 578 0.3997 MADLPGYFRSCFNTGKLACLVILVSGGIVLQILACVMYNNWWPMLTAIMYVLLPMPLLLFAGLDGASSFSESDNWVNAAKFLTGASAVGSIAIPVILMRAGVIGWGALAMELSSFFVFVLAIMYFIRMTDDNYRIQNVLHYSHRILFLSLGELQLCFIFQIQHRPRETEELNKLMMTLDRA 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00420 181 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 1 133 - -
Bva08g00420 181 Coils Coil 171 181 - -
Bva08g00420 181 Pfam Vacuolar protein sorting 55 18 130 IPR007262 -
Bva08g00420 181 PANTHER LEPTIN RECEPTOR-RELATED 1 133 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00420 Bva-Chr8 2156074 2157327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00420 1 133 EF-hand Containing Proteins AT1G32410 68.382 9.83e-62 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00420 - - rcu:8267180 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00420 08 2156074 2157327 Bva11g01895 11 16395435 16397509 BWGD