Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00414 ATGACAGCGTCTTCTGAGAATTGCGTAGTAAGTAAGACTTCTCTGGCGGGGCTTGCTCCACTTCAAGCAGTGCTATTTGATATTGATGGTACTCTTTGTGATTCAGATCCACTCCACTATTATGCTTTCCGTGAAATGCTTCAAGAGATTGGCTTCAATGGAGGTACTCCAATAACAGaggaattttttattgaaaattttgctggCAAACACAGTAATGATGCTGCCTTGGCTATCTTTCCTGGTGATATGGAGCGGGGTTTGAAGTTTTTAGATGACAAGGAAGCCATGTTTTGCAGATTGGCAGCAGAGCAATTGAGGCCTTTGAATGGCCTTGATAAAGTGAGGAAATGGATTGAAGATCGAGGCTTGAAGCTAGCTGCAGTTACTAATGCTCCTAGACCAAATGCTGAACTCATGATCAAAATCCTTGgtctttcagatttttttgATGTTGTTATTATTGGAGGTGAATGTGAACATGCTAAGCCCCATCCAGATCCCTACTTGAAAGCTCTTGAAGCGCTAAAAGCATCGAAAGATCACACTTTTGTATTTGAGGATTCCGTTTCAGGGATCAAAGCTGGAGTGGATGCTGGAATGCCTGTTGTAGGTATAACTACCAGAAACCCGGAGCACTTACTGATGGAAGCAAAGCCTGCTTTTCTAATTAAGGATTATGACGATCCAAAACTTTGGGTAGCTTTGGAACAACTTGACAAGGCTGGTGGTCGAAGATCTTG 743 0.4065 MTASSENCVVSKTSLAGLAPLQAVLFDIDGTLCDSDPLHYYAFREMLQEIGFNGGTPITEEFFIENFAGKHSNDAALAIFPGDMERGLKFLDDKEAMFCRLAAEQLRPLNGLDKVRKWIEDRGLKLAAVTNAPRPNAELMIKILGLSDFFDVVIIGGECEHAKPHPDPYLKALEALKASKDHTFVFEDSVSGIKAGVDAGMPVVGITTRNPEHLLMEAKPAFLIKDYDDPKLWVALEQLDKAGGRRS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00414 247 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 97 206 IPR006439 -
Bva08g00414 247 Gene3D - 22 229 IPR023214 -
Bva08g00414 247 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 168 188 IPR006439 -
Bva08g00414 247 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 21 32 IPR006439 -
Bva08g00414 247 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 150 166 IPR006439 -
Bva08g00414 247 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 119 132 IPR006439 -
Bva08g00414 247 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAINING PROTEIN SGPP 2 244 - -
Bva08g00414 247 SUPERFAMILY HAD-like 19 229 IPR036412 -
Bva08g00414 247 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 21 229 - -
Bva08g00414 247 CDD HAD_BPGM-like 23 208 - -
Bva08g00414 247 Pfam Haloacid dehalogenase-like hydrolase 24 205 IPR041492 -
Bva08g00414 247 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 21 229 - -
Bva08g00414 247 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 2 244 - -
Bva08g00414 247 Gene3D Putative phosphatase; domain 2 36 104 IPR023198 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00414 Bva-Chr8 2138827 2140824 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00414 - - gmx:100802762 419.853