Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00411 ATGATCCCAGGCCGGCAGACTTTCCTAAACACAGTTAAGTGGATTGAAGAGGTGCGAAGCGAGAGAGGCAGCGATGTCATTATTGTTCTTGTTGGGAACAAAACAGACTTAGTGGAGAAAAGGCAAGTCTCTACAGAGGAAGGGGAAGCAAAATCTCGTGAGATAAATGTCATGTTTACTGAAGCTAGTGCCAAAGCTGGTTTTAATATCAAGGCTCTTTTTCGAAAAATTGCTGCTGCTTTACCCGGGATGGAAACACTATCTTCaacaaaacaagaagataTGGTCGATGTGAATTTGAAGTCTTCCGGTGGCTATGAATCTCAACCTGAGTCGGGTGGATGTGCTTGTTG 353 0.4249 MIPGRQTFLNTVKWIEEVRSERGSDVIIVLVGNKTDLVEKRQVSTEEGEAKSREINVMFTEASAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSSGGYESQPESGGCAC 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00411 117 SMART rab_sub_5 5 84 - -
Bva08g00411 117 PANTHER RAS-RELATED PROTEIN RABH1B 4 117 - -
Bva08g00411 117 SMART ras_sub_4 2 84 - -
Bva08g00411 117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 92 IPR027417 -
Bva08g00411 117 ProSiteProfiles small GTPase Ras family profile. 1 117 IPR001806 GO:0003924|GO:0005525
Bva08g00411 117 ProSiteProfiles small GTPase Rab1 family profile. 1 117 - -
Bva08g00411 117 Pfam Ras family 4 80 IPR001806 GO:0003924|GO:0005525
Bva08g00411 117 PRINTS Transforming protein P21 ras signature 24 37 - -
Bva08g00411 117 PRINTS Transforming protein P21 ras signature 59 81 - -
Bva08g00411 117 Gene3D - 2 110 IPR027417 -
Bva08g00411 117 PANTHER DRAB5-RELATED 4 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00411 Bva-Chr8 2128923 2130723 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00411 K07893 - gmx:100527651 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00411 08 2128923 2130723 Bva11g01903 11 16418234 16423035 BWGD
Bva08g00411 08 2128923 2130723 Bva08g00411 08 2128923 2130723 ECH