Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00399 ATGGAGGATATCATCAAAGGCTTAGTTGGTGTTGCTCTCGGTCGCCTCGACAATGATGAGGAGGAACATCGGAACTCACCGTCCCGTGATGAACGATCCAGATCCACCTGGGCTGAGGTTGTCTCCGGAGATCAGGAAGATGATGAAGGGAGAGGTAGGGGTGATCGCAGACCTGGCTACAGTTCAAATCAGTGGAAAAGAGAGGATCAATATCGTCCAGAGCAGGAGCAGTGGGAAGTCGAAAGTTCGAGGATTTCGAACAGACCCTACAAGGAACAATATCGTCCAGAGCAGGAAGGATGGGAAAGTGAAAATCTGAGTACCTCGAAAAGACCCCAgatgtTAGATGGAGATAATGATGACGGATGGCAGACTGTTGGCAAGAAACCTCCAAGGCACAAGGTTCCAAAGGATCACTGGCATGGCTATAAACTAAATCCTAGTGAGCAAGAATACTCTAATGAGGTTGAAATTGATGCCAGTATAGAGCCCTCAGAGGATGAACTAGCTGATCTGTCTCAAGCTTGCAGCAAACTATGGGATCTTGATTTAAATCGTCTGGTACCTGGCAAGGACTACGAAATTGACTgtggtgaagggaaaaaggTTTTCCAGAAGGGAGACATGGCGCAAGGGAACTTGTTCACTTGGGTTAGTGACGACGTATTCAGAAAGCCTACTTTTTCTCGTTTCTGTTCACTCTTGGATAATTACAACCCACATGAAGGGTACAAAGAAGTTGTTTCATCTGAAGAGAGGCAAGAGCAAGCTGCTTTCATAGAAGAAATTAGTAGAACAGCACCATTTAAATATCTTCACAAGTATCTCGCATCCAAGGGTATTGCATCAGGGAACTACCAAGACTTCAAAAGAATGATGACCAGTTTGTGGTTTGACCTTTATGGTCGAGGTGGTACTTCTGGTTCCTCTTCTGCTTTTGAACATGTTTTTGTTGGAGAAATCAAAGAACGTGGTGAAGAAGAAGTTTCTGGCTTTCATAACTGGCTTCAGTTTTACCTTGAAGAAGCAAAAGGGAGAGTTGATTATCAAGGTTATATCTTCCCCCGTTGTCGGGGACAAATTCCAGATTCTGAAACCCAGCTACTCACAATTCAGTTTGAATGGAATGGTGTTCTCAAATCTGTATCTGGCACTTTGATTGGAGTGAGCCCAGAATTCGAAATTGCTTTGTACACCCTGTGTTTCTATGTGGGCAGGGAGGATAACCACATTCAGGTTGGTCCATATGCAGTTAATATCAAGTGCTATCGCTTTGGAGACCGAATAGGATCTATTTTTCCCATTGCTGATGGTTA 1316 0.4339 MEDIIKGLVGVALGRLDNDEEEHRNSPSRDERSRSTWAEVVSGDQEDDEGRGRGDRRPGYSSNQWKREDQYRPEQEQWEVESSRISNRPYKEQYRPEQEGWESENLSTSKRPQMLDGDNDDGWQTVGKKPPRHKVPKDHWHGYKLNPSEQEYSNEVEIDASIEPSEDELADLSQACSKLWDLDLNRLVPGKDYEIDCGEGKKVFQKGDMAQGNLFTWVSDDVFRKPTFSRFCSLLDNYNPHEGYKEVVSSEERQEQAAFIEEISRTAPFKYLHKYLASKGIASGNYQDFKRMMTSLWFDLYGRGGTSGSSSAFEHVFVGEIKERGEEEVSGFHNWLQFYLEEAKGRVDYQGYIFPRCRGQIPDSETQLLTIQFEWNGVLKSVSGTLIGVSPEFEIALYTLCFYVGREDNHIQVGPYAVNIKCYRFGDRIGSIFPIADG 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00399 438 SUPERFAMILY EndoU-like 170 436 IPR037227 -
Bva08g00399 438 Pfam Endoribonuclease XendoU 171 434 IPR018998 GO:0004521
Bva08g00399 438 ProSiteProfiles Eukaryotic uridylate-specific endoribonuclease (EndoU) domain profile. 168 438 IPR018998 GO:0004521
Bva08g00399 438 MobiDBLite consensus disorder prediction 114 128 - -
Bva08g00399 438 CDD XendoU 168 434 IPR018998 GO:0004521
Bva08g00399 438 MobiDBLite consensus disorder prediction 44 99 - -
Bva08g00399 438 PANTHER - 129 437 - -
Bva08g00399 438 MobiDBLite consensus disorder prediction 14 145 - -
Bva08g00399 438 MobiDBLite consensus disorder prediction 15 37 - -
Bva08g00399 438 PANTHER PLACENTAL PROTEIN 11-RELATED 129 437 IPR039787 GO:0004521
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00399 Bva-Chr8 1993773 1998024 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00399 K14648 - vvi:100252369 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00399 08 1993773 1998024 Bva08g00399 08 1993773 1998024 ECH