Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00390 ATGGCACTTGCTTTTACGAAAGACATTCTATTATATAACCATTTCATGAAGAGCTACTTGATTAGTATGGTTTCAGCTTTACCAAGGACCGCCTTGACATCAAATATTCAAGAATTTCTGCATAGTTCTCGAGGTTCTCAACTACCATACGTTCGCAGTGTACTGTTTAATCCATCTCTGCAGAATTTTTCCACTGATAATCAGTGTGAAAGGTTATCATGGGAAGGTTCCACCCACGATATTCTGGTGAGGAAGCTTGAATTTGCTTTGAAGAATCATAAAGTGCACGAAGCATGGGAGGTTTTTCGTGATTTTAAAACCCTCTATGGTTTTCCAGATATTCGCCTTGTGAATCAGCTCATCGTTCAATTGTGTTACTCATCCAATAACCACTGGCTACGCAAAGCATCTGACTTGGTCCTGCAAATTGTCAAAGATAAATCACATTTACTTCAAGCTGATACCTTGATGAAGCTCTCCCTCTCTCTAGCAAGGTTGCAAATGCCAGTTCCTGCCTCAGTGGTTCTTAGACTGTTGCTGGAGACAAAACATGTTCCTCCTTTGAGTTTATTGTCGTTGGTTGTTTTGCATATGGTCAAGACAGAAATTGGAACACATCTTGCATCCAATTATCTGACTCAAGTTTCAGATTGTTTTAAACATTCACGTGATAACAAAGTTCATCATGCACGGCTGATCAAACCAGACACTATGATTTTTAACCTTGTGCTTGAAGCTTGTGTGAGGTTTAAGTTATCTTTGAAAGGACAATACATTTTCGAATTAATGCCACAGATAGCAGTGGTGGCCGATGCTCACTCAATTGTCATTATTTCACAGATCTTTGAGATGAATGGACTTAGGGATGAAATGAAGGAATTGAAAAGCCATGTGGACCAAGTTTCAGCTCCTTATGTTCATCACTATCGTCAGTTCTATAATAGTTTGTTGAGTTTACACTTCAAGTTTAATGACATAGATGCTGCTGCTAAGCTTGTCTTAGATATGAACAGACACCATGATTCTCATATTAGTAGAAAAGATAGCAAAAGCTCACAAATGCCTTACCTTATGGCAATTGGATCTCATAACCTCAAGAGTGGGCTGAAGATAGAGATTGAGCCTGAATTGTTGCAGAAGGATTCTGTCCCAAAAGTGGAAGATAGACaagatcttattttttatagggATGGGAAACTTGTCCTTAGTAACAGAGCTCTGGCCAAGTTCATTTGTCTTTACAAGAAAGATGGGAGGATTAGTGAACTGTCAAAACTTTTACTGAGCGTTCAAGAGGGTCCATATTCATTAGCAGGGTTCAATTTGTGTTGTGATGTGATTGGTGCTTGCATCCACTTTGGCTGGCTTGAAACTGCCCATGACATTGTGGATGACATGGAAGCCGCTGGGTCTCCCATGGGTCGGGATGCGTATATATCACTCCTGTTAGCATACCACAAAGAGAAAATGCATAGAGAAGCGAAGGCATTCCTAAAGCAAATGAAAAAGGTAGGTTTGGGCAAAGAATTTTCTGAGGACACTATTAGCGAACATATCCTTTGTGCTGAAACATCATGTGTGCTTTATAAATCAGATTTGGTTGTCACTTTGGCTCAAGTATTCAAAGACGAAGAGGAGATAGCTTTTCCAATGGTTTATGAGTTCAATTCTGCTATGTATTTTTTCTGCAAGGCAAGAATGATAGATGATGCGCTGAAGGCATATAGAAGAATGGAAGACATGAAAATTCAATCCACTGTTCAAACTTTCGCTTATATGATCTATGGATATTCATCTTTGGGTATGTATCGTGAGATCACATTTTTGTGGGGAGACATTAAGAGATCGATGAGGACTGGCAATTTAGTGCCCAACAGAGATCTATTTGAGTTGCTACTACTAAACTTTCTTAAAGGCGGTTACTTTGAGAGGGTGATGGAGGTCATAGGACATATGAGAGACAATAACATGTATCTAGACAAGTGGATGTATAAAAGCGAGTTCTTAAGACTTCATAAGAATCTTTATAGGAGTTTAAAAGCATCCAATGCTAGAACTGAAGCTCAAAGCAAAAGGCTTGAGTATGTCCAAGCATTTAGAAAATGGGTGGGTATTGATTG 2120 0.3887 MALAFTKDILLYNHFMKSYLISMVSALPRTALTSNIQEFLHSSRGSQLPYVRSVLFNPSLQNFSTDNQCERLSWEGSTHDILVRKLEFALKNHKVHEAWEVFRDFKTLYGFPDIRLVNQLIVQLCYSSNNHWLRKASDLVLQIVKDKSHLLQADTLMKLSLSLARLQMPVPASVVLRLLLETKHVPPLSLLSLVVLHMVKTEIGTHLASNYLTQVSDCFKHSRDNKVHHARLIKPDTMIFNLVLEACVRFKLSLKGQYIFELMPQIAVVADAHSIVIISQIFEMNGLRDEMKELKSHVDQVSAPYVHHYRQFYNSLLSLHFKFNDIDAAAKLVLDMNRHHDSHISRKDSKSSQMPYLMAIGSHNLKSGLKIEIEPELLQKDSVPKVEDRQDLIFYRDGKLVLSNRALAKFICLYKKDGRISELSKLLLSVQEGPYSLAGFNLCCDVIGACIHFGWLETAHDIVDDMEAAGSPMGRDAYISLLLAYHKEKMHREAKAFLKQMKKVGLGKEFSEDTISEHILCAETSCVLYKSDLVVTLAQVFKDEEEIAFPMVYEFNSAMYFFCKARMIDDALKAYRRMEDMKIQSTVQTFAYMIYGYSSLGMYREITFLWGDIKRSMRTGNLVPNRDLFELLLLNFLKGGYFERVMEVIGHMRDNNMYLDKWMYKSEFLRLHKNLYRSLKASNARTEAQSKRLEYVQAFRKWVGID 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00390 706 Pfam PPR repeat 478 505 IPR002885 -
Bva08g00390 706 Pfam PPR repeat 555 582 IPR002885 -
Bva08g00390 706 Gene3D Tetratricopeptide repeat domain 393 525 IPR011990 GO:0005515
Bva08g00390 706 PANTHER BNAC05G43320D PROTEIN 6 706 - -
Bva08g00390 706 PANTHER OS07G0495300 PROTEIN 6 706 - -
Bva08g00390 706 TIGRFAM PPR: pentatricopeptide repeat domain 555 584 IPR002885 -
Bva08g00390 706 Gene3D Tetratricopeptide repeat domain 79 369 IPR011990 GO:0005515
Bva08g00390 706 Gene3D Tetratricopeptide repeat domain 544 704 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00390 Bva-Chr8 1950349 1953275 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00390 - - gmx:100812849 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00390 08 1950349 1953275 Bva08g00390 08 1950349 1953275 ECH