Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00387 ATGGGTCGTAAACCCAATGAACCGGCGCCCACTGTTCGCAGCCGTTTGTTCATACTGTTGGCGTGCTTGATTTCATGCGGCTTGGTCTACGCCCTCGTCTCTGCATTGCTCACAGCCAACCAGACCCTTTCAGTTTTAAACTCGGAGTCATTGGCATTGGATGCAGGCGGTGCTACTAACAAGGCGATCAAGAATTTTGGGGGTGATAATAGAGGGTGTTGCAGAggaattgaaaatttggagCTTTGGGGAGCTGCTGTGAAGTGGGGTTCTGAGTTTAAATTCAACAATTCCGAGGAATGCTGCAACGCGTGTAAATCCATGTGTACTGGAAAGGATGGGCCGTGTCTGTGTGATACGTGGGTATTTTGCGGGAACCGAAAGACTTGCGGTTCCAAGTTCGGTGAGTGCTGgttgaagaaacaaaaggacAGCTTAGCCCCTGAACGGCAAGAAGCAGGGGAACTTGTTAGTTGGACTTCTGGTCTAATCTACGGAAAAGGAGAGGGTATTGTTGGGATGGAAACTGCATATGGAACTCTTCATATAAAGCTTTTCCCCGACTGTGCTCCACATTCTGTAGCATACATTCTAGATCTGTTGGCTTTACACCATTGCGCAGGCTGCCAATTTTATCGTGCAGAGGACCGAGGTCAATCGTGGGACTCGACCGGAAACCACCTAAAAAATGCTGCTTTTGGTCCTCCTTTTGCATTAATCCAAGGGACGCTAGAAGCCCAAGGGACCACATTCAAGGAAATCCCTGTAGAAGAATGTCCTACCATTAGAAGGGGTTCTGTTGCTTGGATTGGTTCTGGCCCAGAATTCTTTATTAGCCTTGCTAACCACGTGGAGTGGAAGAAGGCACACACAGTGTTTGGTTCTGTTCTTCCGGAAGATATGAATATTGCAGAGAAAATTGCCATGTTGCCGACAAAATCAGACGTTTGGAACAATATCAATGTGTCTGTTCTGGAAAAACCAGTCCCCTTGTCTCTGCAAAGAATCAAGAAAAGCCAGGACATTTG 1028 0.4582 MGRKPNEPAPTVRSRLFILLACLISCGLVYALVSALLTANQTLSVLNSESLALDAGGATNKAIKNFGGDNRGCCRGIENLELWGAAVKWGSEFKFNNSEECCNACKSMCTGKDGPCLCDTWVFCGNRKTCGSKFGECWLKKQKDSLAPERQEAGELVSWTSGLIYGKGEGIVGMETAYGTLHIKLFPDCAPHSVAYILDLLALHHCAGCQFYRAEDRGQSWDSTGNHLKNAAFGPPFALIQGTLEAQGTTFKEIPVEECPTIRRGSVAWIGSGPEFFISLANHVEWKKAHTVFGSVLPEDMNIAEKIAMLPTKSDVWNNINVSVLEKPVPLSLQRIKKSQDI 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00387 342 SUPERFAMILY Cyclophilin-like 167 322 IPR029000 -
Bva08g00387 342 PANTHER EXPRESSED PROTEIN 1 339 - -
Bva08g00387 342 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASES 1 339 - -
Bva08g00387 342 Gene3D - 164 328 IPR029000 -
Bva08g00387 342 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 172 318 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00387 Bva-Chr8 1935589 1938231 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00387 - - gmx:100820360 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00387 08 1935589 1938231 Bva08g00387 08 1935589 1938231 ECH