Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00370 ATGAGTGCTTCTATTGTTAATCAGCTTATCTCTGTTCAACCCGATGAGCTCAGGTTCCAATTTGAGCTGGAGAAGCAAACATTTTGCGATCTTAAAGTGCTGAACAACTCGGAGCACCATGTTGCTTTTAAGGTCAAAACCACTTCACCTAAGAAGTACTTTGTACGACCAAACACTGGTGTTATACAGCCTTGGGATTCATGTATCATCAGAGTTACCCTCCAAGCCCAACGAGAATACCCTTCAGATATGCAATGCAAAGATAAGTTTCTCCTCCAGAGTACAACAGTGGCTGCGAATATCGATGCTGATGAGCTTCCACCAGATACTTTTAATAAGGACAGTGGAAAATCAATAGAGGAGCGGAAGCTAAGAGTTGTATATATCTCCCCTTCCTCAGCCCAAGAGAACACAGAAGATGAAGCATTTAAGAGCTCTTCACAAAATCTTGATACTAATTCCAACCAAGCTTTACAGCGcttgaaggaagaaaaagatgcTGCTGCCAAGCAAACGAATCAACTGCAACAGGAATTGGACATGCTGAAAAAGCGAAAAAATCGAAGTGGTCCTGGCTTTTCCTTCCCCTTCGCCATTCTTGTGGGTGTCATTGGAATTATGGTTGGCTTGCTTTTGAAACTTACCTTGTCTTCACCATCTACAGAATCAGAATG 674 0.411 MSASIVNQLISVQPDELRFQFELEKQTFCDLKVLNNSEHHVAFKVKTTSPKKYFVRPNTGVIQPWDSCIIRVTLQAQREYPSDMQCKDKFLLQSTTVAANIDADELPPDTFNKDSGKSIEERKLRVVYISPSSAQENTEDEAFKSSSQNLDTNSNQALQRLKEEKDAAAKQTNQLQQELDMLKKRKNRSGPGFSFPFAILVGVIGIMVGLLLKLTLSSPSTESE 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00370 224 Pfam MSP (Major sperm protein) domain 10 109 IPR000535 -
Bva08g00370 224 PIRSF VAMP_assoc_prot 2 157 IPR016763 GO:0005789
Bva08g00370 224 PIRSF VAMP_assoc_prot 132 214 IPR016763 GO:0005789
Bva08g00370 224 PANTHER VESICLE-ASSOCIATED PROTEIN 2-1 7 219 - -
Bva08g00370 224 Coils Coil 154 185 - -
Bva08g00370 224 SUPERFAMILY PapD-like 7 141 IPR008962 -
Bva08g00370 224 ProSiteProfiles Major sperm protein (MSP) domain profile. 9 129 IPR000535 -
Bva08g00370 224 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 7 219 IPR016763 GO:0005789
Bva08g00370 224 Gene3D Immunoglobulins 3 133 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00370 Bva-Chr8 1823042 1826746 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00370 - - aprc:113869624 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01991 11 16911147 16915368 Bva08g00370 08 1823042 1826746 BWGD