Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00315 ATGGCGGGAGCAGTAGCGGTACCAACCTCTTGCATTTTCTGTCAGATAGCCAACAACGCCACATCCACTGCTCTTCTTCACCACGATGATAAAGTTGTTGCTTTCCAGGATATCAATCCATCAGCCATCAGGCATTACTTAGTTATTCCTGTGGAGCACATTCCCACAGTTAAAGATCTccagagaaaagaagaagactaCACTTTGGTGAATCACATGTCAGAGGTGGGGAAAATGTTATTACTTAGAGATGCGCCTCTGTCCAAGCACAGATTGGGCTTTCATCAACCTCCACTGAACTCCGTTAATCACTTACATCTTCATTGTTTAGCACTACCCTATACACCCAGATGGAGGTCTATAAAATACTTGTCTCTGGGATCAGTTGGTTTTATTGAAGCCGAGAAATTGTTGGAGAAGATAAGGCCTTTGCCCAGGGTTCCTTCAAAGAAAGTAAACTA 461 0.4165 MAGAVAVPTSCIFCQIANNATSTALLHHDDKVVAFQDINPSAIRHYLVIPVEHIPTVKDLQRKEEDYTLVNHMSEVGKMLLLRDAPLSKHRLGFHQPPLNSVNHLHLHCLALPYTPRWRSIKYLSLGSVGFIEAEKLLEKIRPLPRVPSKKVN 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00315 153 SUPERFAMILY HIT-like 10 140 IPR036265 -
Bva08g00315 153 Gene3D - 12 153 IPR036265 -
Bva08g00315 153 ProSiteProfiles HIT domain profile. 12 123 IPR011146 GO:0003824
Bva08g00315 153 PRINTS Histidine triad family signature 100 110 IPR001310 -
Bva08g00315 153 PRINTS Histidine triad family signature 33 51 IPR001310 -
Bva08g00315 153 PRINTS Histidine triad family signature 12 28 IPR001310 -
Bva08g00315 153 PANTHER HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 3 8 142 - -
Bva08g00315 153 PANTHER APRATAXIN-RELATED 8 142 - -
Bva08g00315 153 Pfam Scavenger mRNA decapping enzyme C-term binding 10 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00315 Bva-Chr8 1542772 1546246 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00315 K22966 - jre:108985353 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00315 08 1542772 1546246 Bva08g00315 08 1542772 1546246 ECH