Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00313 ATGATCAAGTCCTTGGCGCCCCTTATACCAACGGGTGTACCTGATCGTTGTGCGATTCCTCGGGGCGATGGCATTTGCCACAAGAAACGTGACAGGAATAAGGCGATAAAAACATGTACTGCATGCATCTGCaatagatttgatttgatttcagAGCGAAGTGGGGATTCGAAAAATGCAGCCAAAGCATGGTATTCGATCCTTCCCAACATGTCGACTTATGCCCTTTGTGTCTCTCCTGAAAAAGagccttcttcttcttcttcgtctCTGTTATTATTCTTGCGTTTACGGAACATCGTTTGCTTACAAATGAATTATTCCAAGCCAACTGCTAAGGATATAATAATAGCAGAAGGCGAGTCACCTACTGGTTCGCAAAGATCTCGGATTGACCCTACTAAGAAGAAAACTCTTCATCGTCCAATTGAAACTCAATGGCAACTCCCTccaatagaaggaaaaaagggaTCTTCAACTTCATCGTCCATTAAGTCAATGTTGAGTTATCCATTCAAAGTTAGGGACAGCTTCAAGAAACTTGGAAGGAGTAAAAGCCTGCAGATGGTTTTAGAAGGAGCTCATGAGCCAAAAGATGAACAACTAGTTGACTCATTCAGGGAATTGCTTTTTCTTGAGGGTCTCTTACCTGCAATGCAAAATGATTATCACACTCTTCTACGGTTCCTGCGGATGAGGGATTATGATCTGCTAAAGGCCAAAGAAGCGTTTCTGAATTTTCTGAAATGGCGAGATGATTTTGAAGTAGATACATTGCCTAAGGAATTTAAATTCAGAGAGTATACGGAAGTAAAGAAATGCTATCCTCATGGATACCATGGAGTTGATAAATATGGTAGACCAGTATATATTGAGAGACTTGGGATGGTAGACCTTGAAAAACTGCTGAATGTAACCACAATTGAGAGGTTTGTGAAGTATCATGTGTCAGAGCAAGAGAAAACACTAACCACGAGATACCCTGCTTGTTCAATTGCAGCTAAGGGGCACATAGCGTCTACTACAACTATATTAGATGTAAATGGAGTGGGAATGTCTAATTTTTCAAAGCCAGCGAGATACCTCTTCATGGAAATTCAGAGAATTGACAGCAGTTACTACCCTGAGACACTGAGTCGGCTCTTTATTATTAATGCTGGATCTGGATTCAGGATGCTGTGGAAAGCAGTAAGAGCTTTTCTGGACGCGCGCACGGCAGCTAAAATTCAAGTGTTGGGTTATAATTATCTGAACGCGGTGCTTGAGGTTGTTGATCCAAGTAATTTACCTACTTTTCTGGGTGGTAACTGCACTTGTTCTGATTATGGCGGTTGCCTGATGAGTGATAGAGGGCCTTGGAACAACccagaaattttagaaatgatTCAGGCAATTTCCTTCAGAGAGGAGATAATTGGTGATAGAGAGAACGGTGCTGTGGGTTCAGAAGATACCTTGGAGCCCCACAAGGATGACATCGAAAACCAAGATACCACTGGTACAAGGACGACAGGACGTGAGGAATCTGCAGGAGCAGACTCTGCATATAAGCTCGCATTACAGAAAATTGATGGGCTAGAAGCCGCTCTTGGAGACACACAGAATAAAATCAAGACACTAGAAGCCGCAATTGAGGACGTCAAGATGGCCTTGCAAGGACTCGCACAACATATGGAAGTATA 1682 0.4084 MIKSLAPLIPTGVPDRCAIPRGDGICHKKRDRNKAIKTCTACICNRFDLISERSGDSKNAAKAWYSILPNMSTYALCVSPEKEPSSSSSSLLLFLRLRNIVCLQMNYSKPTAKDIIIAEGESPTGSQRSRIDPTKKKTLHRPIETQWQLPPIEGKKGSSTSSSIKSMLSYPFKVRDSFKKLGRSKSLQMVLEGAHEPKDEQLVDSFRELLFLEGLLPAMQNDYHTLLRFLRMRDYDLLKAKEAFLNFLKWRDDFEVDTLPKEFKFREYTEVKKCYPHGYHGVDKYGRPVYIERLGMVDLEKLLNVTTIERFVKYHVSEQEKTLTTRYPACSIAAKGHIASTTTILDVNGVGMSNFSKPARYLFMEIQRIDSSYYPETLSRLFIINAGSGFRMLWKAVRAFLDARTAAKIQVLGYNYLNAVLEVVDPSNLPTFLGGNCTCSDYGGCLMSDRGPWNNPEILEMIQAISFREEIIGDRENGAVGSEDTLEPHKDDIENQDTTGTRTTGREESAGADSAYKLALQKIDGLEAALGDTQNKIKTLEAAIEDVKMALQGLAQHMEV 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00313 560 SUPERFAMILY CRAL/TRIO domain 267 462 IPR036865 -
Bva08g00313 560 SMART sec14_4 267 438 IPR001251 -
Bva08g00313 560 SUPERFAMILY CRAL/TRIO N-terminal domain 193 262 IPR036273 -
Bva08g00313 560 Gene3D - 255 466 IPR036865 -
Bva08g00313 560 CDD SEC14 268 436 IPR001251 -
Bva08g00313 560 Coils Coil 523 557 - -
Bva08g00313 560 Pfam CRAL/TRIO domain 275 435 IPR001251 -
Bva08g00313 560 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 267 441 IPR001251 -
Bva08g00313 560 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 133 559 - -
Bva08g00313 560 SMART CRAL_TRIO_N_2 222 247 IPR011074 -
Bva08g00313 560 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH11 133 559 - -
Bva08g00313 560 MobiDBLite consensus disorder prediction 479 497 - -
Bva08g00313 560 Gene3D - 173 254 - -
Bva08g00313 560 MobiDBLite consensus disorder prediction 479 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00313 Bva-Chr8 1531320 1535783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00313 200 432 Acyl Lipid Metabolism Gene Families AT5G47730 28.049 2.53e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00313 - - aip:107643040 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00313 08 1531320 1535783 Bva08g00313 08 1531320 1535783 ECH