Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00312 ATGAGCACTGGAGAGCTCCTTAGCATCGAACCTCTCGAGCTCAAGTTCCCCTTTGAGCTGAAGAAGCAGATCTCGTGTTCTCTTCAATTGTCTAATAAGACCGATAGCTATGTAGCTTTCAAGGTGAAAACAACCAATCCAAAAAAGTATTGTGTTCGTCCAAACACTGGTATTGTCTTGCCACGATCAACATGTGATGTTATAGTTACCATGCAAGCGCAAAAAGAGGCTCCATCTGATATGCAATGCAAGGATAAGTTTCTTCTCCAAAGTGTAAAGACAAACGATGGTGCTGCCGCGAAAGATATCAGCGCAGAAATGTTCAACAAGGAGGCAGGACATGTGGTTGAGGAGTGCAAATTGAAAGTCGTGTATGTTGCTCCACCTCAGCCACCATCTCCCGTTCCAGAAGGTTCTGAAGAAGGGTCATCACCTAGGGGTTCTGTTTCAGAAAATGGAAATGCTAGTAGTGCTGACTTCACAATGGGAACAAGAGCATTTACTGAACGAGCTGAGCTTCAAGACAAGTCCACGGAgGGAAAAGCTCTTATATCGAAGTTGACTGAGGAAAAGAATAATGCGATTCAGCAATCTAACAAGCTTCGCCAGGAACTGGAGCTGCTGAGGCGTGAAGGCAACAAAAGTCGTGGTGGAGTCCCCTTTATGTTTGTCGTCATAATTGGCTTACTCGGCATAATTATGGGATATCTCATGAAGAAGACCTA 725 0.4441 MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDVIVTMQAQKEAPSDMQCKDKFLLQSVKTNDGAAAKDISAEMFNKEAGHVVEECKLKVVYVAPPQPPSPVPEGSEEGSSPRGSVSENGNASSADFTMGTRAFTERAELQDKSTEGKALISKLTEEKNNAIQQSNKLRQELELLRREGNKSRGGVPFMFVVIIGLLGIIMGYLMKKT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00312 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Bva08g00312 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Bva08g00312 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Bva08g00312 241 Coils Coil 184 211 - -
Bva08g00312 241 MobiDBLite consensus disorder prediction 143 160 - -
Bva08g00312 241 MobiDBLite consensus disorder prediction 130 160 - -
Bva08g00312 241 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 239 - -
Bva08g00312 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 239 IPR016763 GO:0005789
Bva08g00312 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Bva08g00312 241 Gene3D Immunoglobulins 2 130 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00312 Bva-Chr8 1525992 1529690 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00312 - - gmx:100527687 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00312 08 1525992 1529690 Bva11g01991 11 16911147 16915368 BWGD
Bva08g00312 08 1525992 1529690 Bva08g00312 08 1525992 1529690 ECH