Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00301 ATGGCTTCTTCTACATCTTCAGCACTCGGTCTCTTCCTCACCATCAATCTACTTTTCTTTACCCTTTCAAGTGGGTGCTACACTTGCTCGCAGCCTAAGCCAATCCCCAACCCATTCCCCACTCCTGCTACCGAATCCAAGAGGAGCTGTACCAGAGATGCGCTGAAGCTGGGAGTATGTGCCAAGCTGCTTAATGGACCAGTTGGTGCAGTGGTTGGTTCACCATTTGACCACCCATGTTGCTCAGTGCTCGAAGGACTTCTTGATCTTGAAGTTGCCGTTTGCCTTTGCACCGCCATCAAAGCAAACATCCTTGGCATTAACATTAACATCCCCATTTCACTCAGCTTGCTTGTTAACACATGTGGCAAGAAGCTGCCCTCTGACTTCCAATGCGCTTA 401 0.4913 MASSTSSALGLFLTINLLFFTLSSGCYTCSQPKPIPNPFPTPATESKRSCTRDALKLGVCAKLLNGPVGAVVGSPFDHPCCSVLEGLLDLEVAVCLCTAIKANILGININIPISLSLLVNTCGKKLPSDFQCA 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00301 133 CDD HPS_like 49 132 IPR027923 -
Bva08g00301 133 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 7 132 - -
Bva08g00301 133 Pfam Hydrophobic seed protein 50 133 IPR027923 -
Bva08g00301 133 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 52 132 IPR036312 -
Bva08g00301 133 SMART aai_6 50 132 IPR016140 -
Bva08g00301 133 PANTHER - 7 132 - -
Bva08g00301 133 Gene3D - 48 133 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00301 Bva-Chr8 1488616 1489241 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00301 40 132 Acyl Lipid Metabolism Gene Families AT4G22490 35.484 3.35e-10 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00301 - - var:108336118 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00301 08 1488616 1489241 Bva08g00301 08 1488616 1489241 ECH