Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00292 ATGGCTTTGTGCAAAGATCTGTTCCTCTGTCTTATCAGCACTTCCTTGCTTGTGAGCTTCTGTTCTGCTGAGGATCCGTTTGTTTACTATAACTTTGAGGTTACTTACATCACTGCTTCTCCCCTTGGAGTACCTCAACAGGTTATAGCAATCAACGACAAGTTTCCAGGTCCTACTATCAATGCAACCACGAATAACAACGTCGTGGTCAACGTTCGAAACAAATTGGACGAGAATCTGCTTATTCATTGGTCTGGGATCCAGCAACGGCGAAGTTCATGGCAAGATGGACTTCTCGGCACCAATTGTCCCATTCCTCCAAAATGGAACTGGACTTACCAATTTCAGGTTAAGGATCAGATTGGAAGTTTTTTCTACTTTCCATCCCTTAATTTGCAAAGAGCATCTGGTGGATTTGGGGGTTTCATCATAAACAACCGGGCTATCATTCCTATTCCATTTGATACTCCTCATGGGgacattgaaatttttataggaGATTGGTACATACGGAATCATACGGCTTTGCGGAAGGCTCTCGATGAAGGGAAAGATCTTGGAATGCCAGATGGTGTTCTCATCAATGGGAAAGGGCCGTATAGATATAATGATACACTTGTTCCTGACGGAATTGACTATGAAACAATCGAAGTCCACCCTGGGAAAACTTATAGGCTTCGTGTGCACAATGTTGGTGTGTCAACTAGTCTGAACTTCAGGATCCAGAATCACAATTTACTACTAGCTGAGTCCGAGGGATCTTATACAGTGCAACAGAACTACACTAGCTTAGATATACATGTTGGACAATCTTATTCTTTTCTGGTAACCATGGATCAAAATGCGAGTACGGATTACTACATCGTTGCAAGTGCCAGGTTTGTGAACGAATCACGTTGGCAGAGAGTTACTGGTGTTGCCATCTTGCACTACACAAATTCCAAGGGGAAGGCAGCCGGTCCTCTCCCAAAAGGTCCAGATGATGAATATGACAAAACCTTCTCAATGAACCAGGCGAGATCCATCAGGTGGAATGTATCAGCAAGTGGTGCTCGCCCTAACCCACAAGGATCTTTCAGATATGGTTCCATCAACGTAACTGAAATTTATGTATTAAGAAATAAGCCACCAGAGAAGATTAACGGGAAGAGACGAGCTACTCTCAGTGGTGTCTCATTCGTTAATCCTTCCACTCCAATTAGGCTCGCTGACCAGTATAAATTAAAGGGAGTATACAAGCTTGATTTTCCCACCAAGCCACTAACAGGGCCTCCTCGGGCAGAAACATCAGTAATTAACGGAACTTTCAGAGGATTTATGGAAATCATACTGCAGAACAACGACACCAAGATGCATTCCTACCACATGAGTGGATAtgcattttttgttgttggGATGGATTATGGCGAGTGGAGTGAGAATAGCAGGGGTACATATAATAAGTGGGATGGAATAGCTCGCGCTACAACACAGGTATATCCTGGAGCTTGGACAGCAATTCTGGTGTCCCTAGACAATGTTGGAGTTTGGAACCTCAGAACGGAGAACCTTGACTCTTGGTATCTCGGTCAAGAAACATATGTCCGGGTTGTCAATCCAGAGGCTACTAACAAGACTGAGCTGCCCATGCCAGATAACGCCCTCCTCTGTGGTGCCCTCAGCAAATACCAGAAgCCGCAAGATATTTCTGCAGCAGCAACATCAATCAACGGGACTAAACTCAAGTTATTCTTCTCCCTGCTAATGTTTCTATGTGTAGTAATTTTCCACTA 1772 0.4317 MALCKDLFLCLISTSLLVSFCSAEDPFVYYNFEVTYITASPLGVPQQVIAINDKFPGPTINATTNNNVVVNVRNKLDENLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQIGSFFYFPSLNLQRASGGFGGFIINNRAIIPIPFDTPHGDIEIFIGDWYIRNHTALRKALDEGKDLGMPDGVLINGKGPYRYNDTLVPDGIDYETIEVHPGKTYRLRVHNVGVSTSLNFRIQNHNLLLAESEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESRWQRVTGVAILHYTNSKGKAAGPLPKGPDDEYDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEIYVLRNKPPEKINGKRRATLSGVSFVNPSTPIRLADQYKLKGVYKLDFPTKPLTGPPRAETSVINGTFRGFMEIILQNNDTKMHSYHMSGYAFFVVGMDYGEWSENSRGTYNKWDGIARATTQVYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYVRVVNPEATNKTELPMPDNALLCGALSKYQKPQDISAAATSINGTKLKLFFSLLMFLCVVIFH 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00292 590 Pfam Multicopper oxidase 163 313 IPR001117 -
Bva08g00292 590 Pfam Multicopper oxidase 403 533 IPR011706 GO:0005507|GO:0016491
Bva08g00292 590 PANTHER MULTI-COPPER OXIDASE 12 562 IPR045087 -
Bva08g00292 590 Gene3D - 363 561 IPR008972 -
Bva08g00292 590 SUPERFAMILY Cupredoxins 378 552 IPR008972 -
Bva08g00292 590 Gene3D - 158 351 IPR008972 -
Bva08g00292 590 SUPERFAMILY Cupredoxins 156 353 IPR008972 -
Bva08g00292 590 CDD CuRO_1_AAO_like_1 28 145 IPR034273 GO:0005507
Bva08g00292 590 PANTHER MONOCOPPER OXIDASE-LIKE PROTEIN SKS1 12 562 - -
Bva08g00292 590 SUPERFAMILY Cupredoxins 23 173 IPR008972 -
Bva08g00292 590 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
Bva08g00292 590 Gene3D - 18 146 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00292 Bva-Chr8 1420701 1424857 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00292 - - cit:102622059 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00292 08 1420701 1424857 Bva08g00292 08 1420701 1424857 ECH