Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00278 ATGTTACAGTTGAAGACAGTGCCGCTGTCAGACATTGACAATATACCGTCGACGCCTGGCAAGTTTAAGTCGGAGAAATCTCCCTACATTCATCGCCTCAGGTTCCATTCTACTCTCTCCAGACTCACTCTCTGGTCTTCCTTTTTTCTGGccttcattatatttttcttctttctctctcctccgtTGGCTTCTCCTTCTTCCGCCGTCGGCTCCCCTCGTCGAGCTATCGGTGACTCCTGGGGTGGACCCGATTGGGAAAAACGTGTCAGCAAATCGGCACGTAGGAAATCTGCATCTGGCTTCACAGTCCTAGTAACTGGGGCGGCTGGTTTTGTCGGCACCCACGTGTCTGTGGCGTTGAAGCGGCGGGGTGATGGCGTGCTTGGACTTGACAATTTCAATCACTACTATGATCCCAACCTCAAACGGGCCCGGCAAAAGCTTCTTGAACGCGCTGGGGTATTTGTTGTCGAGGGAGATATCAACAATTCGGTGCTTCTTCAGAAGCTTTTCGATGTTGTGCCTTTTACCCATGTAATGCACCTTGCGGCACAGGCGGGCGTTCGCTACGCAATGCAGAATCCCGGGTCCTATGTACACAGCAATATCGCTGGCTTTGTCAATCTTCTTGAAGTGTGTAAATCGGCGAATCCGCAACCTGCGATTGTTTGGGCATCTTCAAGTTCCGTTTATGGGTTTAATTCTAAGGTGCCATTCTCAGAAAAAGACAGAACTGATCAACCAGCCAGTCTTTATGCTGCTACTAAAAAGGCTGGTGAAGAAATTGCGCATacttataatcatatatatgggCTTTCAATTACTGGGTTGCGGTTCTTCACGGTGTATGGTCCATGGGGTCGCCCTGATATGGcttatttcttcttcacaAAAGATATTCTTAAAGGAAAGACAATTACCATTTTTCAGTCCCCTGATCATGGAACCGTTGCAAGAGATTTTACCTACATCGATGATGTTGTTAAAGGGTGTCTGGCGGCTTTGGATACGGCCAAGAAAAGTACCGGTAGTGGTGGGAAGAAGAAGGGACCTGCACAATTGAGGATTTTTAATCTGGGTAATACTTCACCAGTGCCCGTGAGTGAGCTTGTAAGCATTTTGGAGAAGCTCCTGAAGGTGAAGGCTAAAAAGAAGTTGGTTCCAATGCCAAGAAATGGCGATGTTAAATTTACACATGCGAACATTAGCATAGCGCACAAGGAGCTTGACTACAGACCTACTACTGATTTGGAGACGGGACTCAGGAAGTTTGTACGGTGGTACCTTGACTTTTATTCCGGGTCTAAGAAGAAGAGTGCATGGTG 1328 0.4533 MLQLKTVPLSDIDNIPSTPGKFKSEKSPYIHRLRFHSTLSRLTLWSSFFLAFIIFFFFLSPPLASPSSAVGSPRRAIGDSWGGPDWEKRVSKSARRKSASGFTVLVTGAAGFVGTHVSVALKRRGDGVLGLDNFNHYYDPNLKRARQKLLERAGVFVVEGDINNSVLLQKLFDVVPFTHVMHLAAQAGVRYAMQNPGSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGFNSKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTKDILKGKTITIFQSPDHGTVARDFTYIDDVVKGCLAALDTAKKSTGSGGKKKGPAQLRIFNLGNTSPVPVSELVSILEKLLKVKAKKKLVPMPRNGDVKFTHANISIAHKELDYRPTTDLETGLRKFVRWYLDFYSGSKKKSAW 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00278 442 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 100 436 IPR036291 -
Bva08g00278 442 Gene3D - 103 434 - -
Bva08g00278 442 PANTHER UDP-GLUCURONATE 4-EPIMERASE 5 13 440 - -
Bva08g00278 442 Pfam NAD dependent epimerase/dehydratase family 104 341 IPR001509 -
Bva08g00278 442 PRINTS Nucleotide sugar epimerase signature 130 146 - -
Bva08g00278 442 PRINTS Nucleotide sugar epimerase signature 355 370 - -
Bva08g00278 442 PRINTS Nucleotide sugar epimerase signature 395 412 - -
Bva08g00278 442 PRINTS Nucleotide sugar epimerase signature 320 335 - -
Bva08g00278 442 PANTHER EPIMERASE-RELATED 13 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00278 Bva-Chr8 1340599 1342629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00278 9 441 Miscellaneous Gene Families AT4G00110 75.751 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00278 K08679 - fve:101298705 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00278 08 1340599 1342629 Bva08g00278 08 1340599 1342629 ECH