Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00275 ATGGGTCTGAGCGACGACCAAGTTTCTTCCATCAAGGAAGCTTTTACGCTCTTCGATACCGACGGTGACGGTCGGATCGCTCCTTCGGAGCTTGGGATCCTCATGCGCTCTCTTGGTGGAAACCCAACCCAAGCCCAGCTCAAGGCCATCATCGCCGAAGAAAAACTCACCGCTCCCTTCGACTTCCCTCGATTTCTCGATCTCATGGCCAAGCACATGAAGACGGAGCCCTTCGACCGCCAACTTCGCGACGCCTTCAAGGTTCTTGACAAGGACTCCACTGGCTTCGTCTCCGTCACTGAGCTTCGACACATTCTAACCAGCATTGGCGAGAAACTTGAGCCCGCCGAGTTTGACGAATGGATCAGGGAAGTCGATGTCGGCTCCGACGGCAAGATCCGTTACGAGGATTTCATTGCCAGAATGGTCGCTAAGTG 437 0.5469 MGLSDDQVSSIKEAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEEKLTAPFDFPRFLDLMAKHMKTEPFDRQLRDAFKVLDKDSTGFVSVTELRHILTSIGEKLEPAEFDEWIREVDVGSDGKIRYEDFIARMVAK 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00275 145 CDD EFh 11 53 IPR002048 GO:0005509
Bva08g00275 145 PANTHER BNAA09G47210D PROTEIN 2 145 - -
Bva08g00275 145 CDD EFh 81 142 IPR002048 GO:0005509
Bva08g00275 145 SUPERFAMILY EF-hand 3 142 IPR011992 -
Bva08g00275 145 SMART efh_1 117 145 IPR002048 GO:0005509
Bva08g00275 145 SMART efh_1 10 38 IPR002048 GO:0005509
Bva08g00275 145 SMART efh_1 81 109 IPR002048 GO:0005509
Bva08g00275 145 ProSiteProfiles EF-hand calcium-binding domain profile. 113 145 IPR002048 GO:0005509
Bva08g00275 145 ProSitePatterns EF-hand calcium-binding domain. 90 102 IPR018247 -
Bva08g00275 145 Pfam EF hand 11 38 IPR002048 GO:0005509
Bva08g00275 145 PANTHER CALCIUM BINDING PROTEIN 2 145 - -
Bva08g00275 145 ProSiteProfiles EF-hand calcium-binding domain profile. 77 112 IPR002048 GO:0005509
Bva08g00275 145 ProSiteProfiles EF-hand calcium-binding domain profile. 6 41 IPR002048 GO:0005509
Bva08g00275 145 Pfam EF-hand domain pair 80 142 IPR002048 GO:0005509
Bva08g00275 145 Gene3D - 80 143 - -
Bva08g00275 145 ProSitePatterns EF-hand calcium-binding domain. 19 31 IPR018247 -
Bva08g00275 145 Gene3D - 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00275 Bva-Chr8 1329130 1330615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00275 2 145 EF-hand Containing Proteins AT1G12310 88.194 5.90e-93 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00275 K13448 - jre:109011146 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00275 08 1329130 1330615 Bva08g00275 08 1329130 1330615 ECH