Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00255 ATGTCACCAACGTCTAAGCTCGGAGACAACCACCTATGCGATAAAACCGCCATAGCAGCACCATCTCTTACTCAACATCAACAATGGTCGGGCCCTACGAATTTTGGCAAGATGCTGCTTTCCGAGTTAAAAAGACAACAGGGGATAGCCCTGCCGTTGGTGGCCATGAATTTGGCTTGGTTTGCCAAGACAGCCATCACAACTGCATTTCTGGGCCGTCTGGGGGAGCTTAACTTAGCCGGTGGCGCTCTCGGCTTCACTTTTGCTAATGTTACCGGTTTCTCTGTCTTGAATGGCCTCTCTGGTGCCATGGAATCCATTTGTGGACAAGCTTATGGAGCTAAAAATTTCAGACTCCTTCATAAGACCCTTCTAATGACTGTCTTCTTGTTGCTATTGGTCACAGTTCCAATATCTTTTTTGTGGCTTaatgttgataaaattttaattcattttggcCAACAAAGAGACATTTCGATTGTAGCCAGAACCTATATTTCGTATCTCTTGCCCGACTTGTTAGTCACCTCATTTCTCTGCCCCTTGAAAGCCTACTTGAGCTCTCAGTGCATAACCCTTCCAACTATGTTTAGCACAGGTGTGGCTCTGGCCTTCCACATACCCATAAACATACTACTCTCGAAGGCTATGGGGCTTAGAGGAGTTTCAATGGCAGTTTGGATCACTGATCTAATAGTTGTGCTTCTACTCGccatttatgttttgattcttGAAAATAGAAAGGGAAACAGGTGGAGGGAAGGAGGATGGTGGGATCAAAGCGTTAAGGATTGGATTATAATGCTCAAGCTTAGCGGATCATGCTGCCTTAATACCTGCCTGGAGTGGTGGTGTTATGAGATTCTGGTCTTGCTCACTGGCCACCTTGCAAATGCTAAGCAAGCAGTAGGAGTTTTGGTCATTGTGCTAAACTTTGACTATCTCCTGTTCTCAGTGATGCTATCGCTTGCCACTTGTGTTTCCACTCGTGTCTCAAATGAGCTTGGTGCTAACCAAGCTGGGAATGCTTACAGGTCAGCGTTTGTGTCTCTTGCAGCCGGCATTATCTCAGGTTGCCTAGGAAGCTTGCTGATGGTGGGTGCGAGGGGAATTTGGGGGCCCCTGTTTAGCCATGATAAGGGCATTATAAGGGGCGTAAAGAAGACCATGTTGCTGATGGCTCTGGTGGAAGTATTCAATTTCCCGTTAGCAGTTTGTGGAGGCATTGTCCGGGGAACAGCTCGTCCCTGGATGGGCATGTATGCTAATCTTGCTGGATTTTATCTTCTTGCCCTGCCCCTCGGCATCTTTTTTGCCTTCAAGCTCCATCTAGGCCTTCCTGGACTCTTCATAGGACTTTTGATTGGTATATTTACGTGCTTGATGCTGTTACTAGTATTCATTGCCAGGATGAATTGGGTGGAAGAAGCTGGCAAGGCACAAACGCTTGCATCTAATGGACAGGCATGGGTTGCCGCAGATGGCGCAAGCCAACAAACTGAAAATGCTcaattata 1517 0.4562 MSPTSKLGDNHLCDKTAIAAPSLTQHQQWSGPTNFGKMLLSELKRQQGIALPLVAMNLAWFAKTAITTAFLGRLGELNLAGGALGFTFANVTGFSVLNGLSGAMESICGQAYGAKNFRLLHKTLLMTVFLLLLVTVPISFLWLNVDKILIHFGQQRDISIVARTYISYLLPDLLVTSFLCPLKAYLSSQCITLPTMFSTGVALAFHIPINILLSKAMGLRGVSMAVWITDLIVVLLLAIYVLILENRKGNRWREGGWWDQSVKDWIIMLKLSGSCCLNTCLEWWCYEILVLLTGHLANAKQAVGVLVIVLNFDYLLFSVMLSLATCVSTRVSNELGANQAGNAYRSAFVSLAAGIISGCLGSLLMVGARGIWGPLFSHDKGIIRGVKKTMLLMALVEVFNFPLAVCGGIVRGTARPWMGMYANLAGFYLLALPLGIFFAFKLHLGLPGLFIGLLIGIFTCLMLLLVFIARMNWVEEAGKAQTLASNGQAWVAADGASQQTENAQL 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00255 505 PANTHER MULTIDRUG RESISTANCE PROTEIN 31 488 - -
Bva08g00255 505 PANTHER PROTEIN DETOXIFICATION 56 31 488 - -
Bva08g00255 505 TIGRFAM matE: MATE efflux family protein 52 449 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva08g00255 505 CDD MATE_eukaryotic 42 479 IPR045069 GO:0042910|GO:1990961
Bva08g00255 505 Pfam MatE 52 211 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva08g00255 505 Pfam MatE 275 435 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00255 Bva-Chr8 1239197 1240714 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00255 K03327 - gmx:100804083 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00255 08 1239197 1240714 Bva08g00255 08 1239197 1240714 ECH