Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00253 ATGGCTACCTCTGGTGTTCATAATTATAGAAATGGCACTCATAGCCACAGAAGTTCTCTCAAGGTGGACAGGCCTCTCTCCGTCAACTCAAACCCCAAGTCTCTTCTCAAGTCAAAGCCTTTGCCTGCTAATGGGCCACGCCGGAATAGCACCGGCTCCATCAACAGCACCACCGCAGCTTCTAAGGACGATGCTGGAGTTCCGGGAAGAGTCAGAGTGGCAGTTAGATTGCGCCCAAAGAATACAGAGGAATTGGCGGCAGATGCTGATTTTGCAGACTGTGTGGAACTACAGCCAGAGCTCAAAAGGTTGAAACTTCGGAAGAACAATTGGGATTCTGATGCTTACGAATTTGATGAGGTGCTCACTGAATTTGCATCACAAAAGCGTGTTTATGAAATTGTGGCTAGGCCTGTTGTGGAGAGTGTACTAGATGGTTATAATGGAACAATTATGGCATATGGGCAGACTGGTACTGGTAAAACTTATACTCTTGGACGACTTGGGGAGGAAGACACAGCAGCACGTGGCATAATGGTGCGTGCTATGGAGGATATTCTGGCAGATGTTTCCTTGGAAATCGATTCTGTTTCAGTCTCCTATTTGCAGCTTTATATGGAGACTGTACAAGATCTTCTTGACCCCACTAACGATAACATAACCATTGTCGAAGACCCCAAAACTGGAGATGTTTCACTGCCTGGAGCTAGGCTAGTTGAAATTAGGGACCAGCAGAGTTTTATAGAACTACTACGATTAGGGGAGGCTCACCGCTTTTCTGCAAATACAAAATTGAATACAGAATCTTCTCGAAGTCATGCTATTCTAATGGTGCATGTAAAGAAATCTGTCAAGGGAAGAGATTCGGCtcattcaaatgaaaatagcAACCATACACACATGGTCAAATCATTAAAGCCTCCTGTTGTTCGGAAGGGCAAGTTGGTTGTTGTAGATCTTGCTGGTTCAGAGCGAATTGATAAGTCAGGAAGTGAAGGACATACACTAGAGGAAGCTAAATCTATTAATCTGTCCCTAAGTGCGTTGGGAAAATGTATTAATGCACTGGCAGAGAACAGTGCACATGTGCCATTTCGTGATTCGAAGCTTACTAGATTACTACGTGATTCATTTGGAGGTACAGCAAGAACTTCATTGGTCATTACGATTGGTCCTTCTCCACGTCATCGAGGAGAGACTGCCAGTACCATAATGTTTGGACAGAGGTCTATGAAGGTGGAAAACATGGTAAAATTGAAGGAGGAGTTTGATTACAAAAGCTTATCTAGAAGGCTAGACATACAGTTAGACAAGCTTATTATGGAAAATGAAAGGCAGCAGAAGGCTTTTGAAGATGAAATTGAAAGGTTAACCATAGAAACTGAGTATCGGATATCTGAGGCTGAAAAAAACTATGTCAACGCACTGGAGAAGGAAAGGTTGAAATACCAGAAAGACTACATGGAATCAATTAAGAAGCTTGAAGAGCAGTTGGTGATCAATCAGGGTAGAAATGAGAATTCTCATGTGACATCAAATGTAGAgGTGTCTTCTGAGGAAGTGGCTGATCTGAAAAAAAGGCTCCAGAAAGAAACTCTTTTGAAAAAAGCTGCTGAAGGGGAAGTCAACAATCTGAAAAATCAAGTGGCAGAATTGAAAAAGTCAGAGGCATCAAGAAACTCAGAGATCTTAAAACTTCACAAGTTGTTGGAAGAGGAGGCACgccaaaaagagaaactaGAAGGAGAAATAGCAATATTACAAAGtcagttgttgcagttaagtTTTGAAGCTGACGAGacaAGACAGCAGCTTGACAGAGGTGGATCGGAACAAGATACTGGTGGTCTTGATTCTCTTAAGTCCGAGCTTAAGCATCAGCAGCAAGCTTCAGGACATGGAGAGAAGTCCTCTATGGCTAAGCTCTTTGAACAAGTGGGGTTGCAGAAGATTTTGTCATTGCTTGAAGCGGAAGATATTGATGTGCGAGTCCATGCTGTGAAAGTTGTAGCAAATCTAGCTGCTGAAGAAACAAATCAGAAGAAGATTGTAGAAGCGGGTGGTCTCACATCCTTGCTTATGTTGCTTAAAAGCTCCCAAGATGAGACCATACATAGAGTTGCAGCTGGTGCTATTGCTAATTTGGCAATGAATGAAACCAACCAAGAATTAATTATGGCCGAAGGGGGCATTAGTTTGTTGTCGATGACAGCAGCCAATGCTGATGATCCTCAGACCCTTCGAATGGTTGCTGGAGCCCTTGCTAATCTTTGTGGCAATGACAAGTTACAAACCAAGCTAAGAGATGAGGGTTGTATCAAAGCACTGCTGGGAATGGTCAGATGCAGGCATCCTGATGTACATGCGCAGGTTGCTCGCGGAATAGCAAACTTTGCAAAATGTGAGTCAAGAGCATCTACTCAAGGGACAAAAACTGGAAGGTCTTTCCTTATTGAGGATGGCGCGCTTCCATGGATAGTAGAGAACGCAAATAATGAAGCCTCCTCAGTTAGGCGTCACATCGAGCTTGCACTCTGTCACTTAGCACAGCATGAAGTGAATGCAAGAGATATGATTGTTGGAGGTGCATTGCGGGAGCTGGTTCGTATCTCACGAGATTGTTCCAGGGAAGACATAAGGACTCTTGCACATCGAATTCTCATCTCCAGCCCCACTTTCCAAGCAGAGATTAGGCGTTTGCGAATAGATCATTA 2714 0.4274 MATSGVHNYRNGTHSHRSSLKVDRPLSVNSNPKSLLKSKPLPANGPRRNSTGSINSTTAASKDDAGVPGRVRVAVRLRPKNTEELAADADFADCVELQPELKRLKLRKNNWDSDAYEFDEVLTEFASQKRVYEIVARPVVESVLDGYNGTIMAYGQTGTGKTYTLGRLGEEDTAARGIMVRAMEDILADVSLEIDSVSVSYLQLYMETVQDLLDPTNDNITIVEDPKTGDVSLPGARLVEIRDQQSFIELLRLGEAHRFSANTKLNTESSRSHAILMVHVKKSVKGRDSAHSNENSNHTHMVKSLKPPVVRKGKLVVVDLAGSERIDKSGSEGHTLEEAKSINLSLSALGKCINALAENSAHVPFRDSKLTRLLRDSFGGTARTSLVITIGPSPRHRGETASTIMFGQRSMKVENMVKLKEEFDYKSLSRRLDIQLDKLIMENERQQKAFEDEIERLTIETEYRISEAEKNYVNALEKERLKYQKDYMESIKKLEEQLVINQGRNENSHVTSNVEVSSEEVADLKKRLQKETLLKKAAEGEVNNLKNQVAELKKSEASRNSEILKLHKLLEEEARQKEKLEGEIAILQSQLLQLSFEADETRQQLDRGGSEQDTGGLDSLKSELKHQQQASGHGEKSSMAKLFEQVGLQKILSLLEAEDIDVRVHAVKVVANLAAEETNQKKIVEAGGLTSLLMLLKSSQDETIHRVAAGAIANLAMNETNQELIMAEGGISLLSMTAANADDPQTLRMVAGALANLCGNDKLQTKLRDEGCIKALLGMVRCRHPDVHAQVARGIANFAKCESRASTQGTKTGRSFLIEDGALPWIVENANNEASSVRRHIELALCHLAQHEVNARDMIVGGALRELVRISRDCSREDIRTLAHRILISSPTFQAEIRRLRIDH 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00253 904 PANTHER KINESIN-RELATED 52 896 IPR027640 GO:0003777|GO:0007018
Bva08g00253 904 CDD KISc 70 411 - -
Bva08g00253 904 SUPERFAMILY ARM repeat 639 887 IPR016024 -
Bva08g00253 904 ProSiteProfiles Kinesin motor domain profile. 70 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva08g00253 904 PRINTS Kinesin heavy chain signature 290 307 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva08g00253 904 PRINTS Kinesin heavy chain signature 314 332 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva08g00253 904 PRINTS Kinesin heavy chain signature 146 167 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva08g00253 904 PRINTS Kinesin heavy chain signature 363 384 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva08g00253 904 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 687 730 IPR000225 GO:0005515
Bva08g00253 904 PANTHER KINESIN-LIKE PROTEIN KIN-UA 52 896 IPR033291 GO:0008017|GO:0032886|GO:0048364
Bva08g00253 904 MobiDBLite consensus disorder prediction 1 66 - -
Bva08g00253 904 Gene3D Kinesin motor domain 61 441 IPR036961 -
Bva08g00253 904 MobiDBLite consensus disorder prediction 22 37 - -
Bva08g00253 904 MobiDBLite consensus disorder prediction 1 15 - -
Bva08g00253 904 Pfam Kinesin motor domain 76 412 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva08g00253 904 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 448 IPR027417 -
Bva08g00253 904 Coils Coil 436 460 - -
Bva08g00253 904 Coils Coil 563 597 - -
Bva08g00253 904 ProSitePatterns Kinesin motor domain signature. 313 324 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bva08g00253 904 MobiDBLite consensus disorder prediction 615 635 - -
Bva08g00253 904 SMART arm_5 636 675 IPR000225 GO:0005515
Bva08g00253 904 SMART arm_5 760 800 IPR000225 GO:0005515
Bva08g00253 904 SMART arm_5 718 759 IPR000225 GO:0005515
Bva08g00253 904 SMART arm_5 676 717 IPR000225 GO:0005515
Bva08g00253 904 SMART kinesin_4 68 421 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva08g00253 904 Pfam Armadillo/beta-catenin-like repeat 679 716 IPR000225 GO:0005515
Bva08g00253 904 MobiDBLite consensus disorder prediction 602 636 - -
Bva08g00253 904 Coils Coil 521 555 - -
Bva08g00253 904 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 646 688 IPR000225 GO:0005515
Bva08g00253 904 MobiDBLite consensus disorder prediction 44 62 - -
Bva08g00253 904 Gene3D - 442 889 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00253 Bva-Chr8 1217588 1226216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00253 71 439 Miscellaneous Gene Families AT2G21380 32.546 2.32e-44 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00253 - - gmx:100804612 1425.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00253 08 1217588 1226216 Bva08g00253 08 1217588 1226216 ECH