Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00242 ATGCTATTTAGTGGCGACCCACAAAATGAAAGGGACATGGGAGTTAACGATGGCTCCAATCGGACAGCTTTTTCTGATATAACGATGCCAAGGCAGGTAATCGAAGGAGCACTCCCTTTGATACCTTCCACTAAAGATGAAAAGAGGGAGGGTGGAACTGTGGATCCATCCAGAAGAGGCCAGAAAATATCTCAACAAGTGTTGCCATCACCACAATTCGGGGCGATTGATCTAAAActgaaaccaaaaccaaaaataaaaagaaaaggaataattgaaaaaatggcATTTCTGAGGTCAGTGGCAACGGCCGCTGCATCTACCATTCCTGCAGCATTAGCGTTTTCCGCCCTTACATCCTCTTCCTCCCAATCTTGCCAATTTCCTAAAACCCGGAACGTGGTCTTCCCCCCCACCTCGCCAACTTGGGACCCGAATCGTTTGGGCCTTGTCAAAACATTTGCTTACTCTCCTTCGTCTCTGCACATGGACGCGCCGCCCTCAGAACTCAATCCTTCTTTTCAGAATGATTCTCTCTCGCCGGAGTTACTGACGGAGTACATGGTGGATATGAAATGTGAAGGCTGTGTTAATGCGGTGAAGAACAAATTGCAGGCAATAGATGGAGTGAAGAACGTAGAGGTGGACCTGAGCAATCAGGTAGTTCGGATTCTTGGTTCAACACCAGTGAAGACTATGACGGAAGCTTTGGAACAGACTGGTAGAAAAGCCCGATTAATTGGACAAGGAGTGCCTGAAGACTTCTTAATATCTGCTGCTGTCTCAGAATTCAAAGGCCCAGATATTTTTGGTGTTGTTCGCCTTGCTCAAGTGAACATGGAACTGGCTAGGATTGAAGCCAACTTCAGTGGGCTGTCGCCCGGAAAGCATGCTTGGTCTATTAATGAGTTTGGAGATCTGACCAGAGGTGCAGCAAGCACTGGGAAAGTGTTTAATCCAACAAATGCGGGGAACACTAAAGAGCCACTTGGCGACCTGGGAACACTAGAGTCAGATAAAAAGGGCGAAGCCTTCTTCACAGGCGTCAAAGAAAATCTTAGGGTGGCTGATCTTATTGGACGATCTGTGGCGGTATATGCAACTCAAGATAAATCAGATCACGGTATAGCTGCTGCAGTAATTGCCAGAAGTGCAGGAGTTGGtgagaattataaaaaactCTGTACGTGTGATGGTACCACCATCTGGGAAGCTAGCAACAGAGATTTTGTTACCAGCAAAGTctg 1247 0.4483 MLFSGDPQNERDMGVNDGSNRTAFSDITMPRQVIEGALPLIPSTKDEKREGGTVDPSRRGQKISQQVLPSPQFGAIDLKLKPKPKIKRKGIIEKMAFLRSVATAAASTIPAALAFSALTSSSSQSCQFPKTRNVVFPPTSPTWDPNRLGLVKTFAYSPSSLHMDAPPSELNPSFQNDSLSPELLTEYMVDMKCEGCVNAVKNKLQAIDGVKNVEVDLSNQVVRILGSTPVKTMTEALEQTGRKARLIGQGVPEDFLISAAVSEFKGPDIFGVVRLAQVNMELARIEANFSGLSPGKHAWSINEFGDLTRGAASTGKVFNPTNAGNTKEPLGDLGTLESDKKGEAFFTGVKENLRVADLIGRSVAVYATQDKSDHGIAAAVIARSAGVGENYKKLCTCDGTTIWEASNRDFVTSKV 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00242 415 PANTHER SUPEROXIDE DISMUTASE CU-ZN -RELATED 92 415 IPR024134 -
Bva08g00242 415 MobiDBLite consensus disorder prediction 13 27 - -
Bva08g00242 415 PANTHER COPPER CHAPERONE FOR SUPEROXIDE DISMUTASE, CHLOROPLASTIC/CYTOSOLIC 92 415 - -
Bva08g00242 415 MobiDBLite consensus disorder prediction 39 60 - -
Bva08g00242 415 CDD HMA 186 245 IPR006121 GO:0046872
Bva08g00242 415 Gene3D - 176 252 - -
Bva08g00242 415 SUPERFAMILY HMA, heavy metal-associated domain 185 247 IPR036163 GO:0046872
Bva08g00242 415 ProSiteProfiles Heavy-metal-associated domain profile. 183 246 IPR006121 GO:0046872
Bva08g00242 415 MobiDBLite consensus disorder prediction 1 27 - -
Bva08g00242 415 SUPERFAMILY Cu,Zn superoxide dismutase-like 249 407 IPR036423 GO:0006801|GO:0046872
Bva08g00242 415 Pfam Copper/zinc superoxide dismutase (SODC) 271 374 IPR001424 GO:0006801|GO:0046872
Bva08g00242 415 MobiDBLite consensus disorder prediction 42 56 - -
Bva08g00242 415 Pfam Heavy-metal-associated domain 187 243 IPR006121 GO:0046872
Bva08g00242 415 Gene3D Superoxide dismutase, copper/zinc binding domain 253 383 IPR036423 GO:0006801|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00242 Bva-Chr8 1169725 1173590 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00242 K04569 - qsu:112021271 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00242 08 1169725 1173590 Bva08g00242 08 1169725 1173590 ECH