Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00240 ATGTCTTCTGATAGTGCAAAGGAAAATGCGTCAGTAGTAGATTCATCAGTGACTGAATGGAAGCAGGATATTGGAAATTCAGACGATCCAGAGAGCTCAAGTTACAAGGCTAATGAAAACAGTGGTCCAACTAGGGCAGATAAAAAAGGATGTTCTCATCGTCAGAGAGGGGTTCCTACTGGATTTGAAACGGAGAAAGGAATTTGGGCTACTCAAATCATGAACGAACCAATCCTAGAAGAAGCCTTCCATAATTCAATAAGAGTGATCCTTATATTTAGTGTCAACATGAGTGGTTCCTTCCAAGGGTACGCTCAAATGATGTCTCCTATTGGGTGGAGGAGAGACAATGTTTGGAGTGAAGGAAGCAGTAACAGTAATCCCTGGGGTCGCAGTTTTAAGGTCAAGTGGCTGCAGTTAAATAACTTACCTTTCCATAAGACTCTCCACCTCAAGAATCCGTTGAATGACTATAAACCTGTCAAAATTAGCAGAGATTGCCAGGAGTTATCTCGAGACGTTGGTGAAGCTCTTTGCGAACTCCTTGATGTGGAGAATGATGTGGATGGCTTATTGAGTAGCAGTAGTTCATCCAGGgatggtttttctttgaaggGAAATTCTGCAGAGACTCCAAGTTCCATGGCAGATGAAGATCGTAACTTTCCCCCACTAAATATGTCATGGTCAATGCCCATGCCTTATCCTTCCTTGCCGTATCAAAATCAAGCTgaactaaataaatatcattcagCAAATCAGAGATTTTGTTGGACGACTTTCGATGAAGCGTTACCTATCACTTCTGGGTTGTCAAAAGTGGCAGGGACTAAGCGCTCTCATTTTAGTGGGCAGATCCCTAAGCTACAAGTGGACAGGGATGTGGGTTCTcaatttgatgtttggggtCTGTCTGCAGAAAGTCCTCTAGCTAGTACGCTAACTGATGATGATTTTCTTGATATGTCCTATGAAGAATACCTGGAGGTTCATAGCAGATGTAGGAAACAATTACGGTTCAATGCAGCTATACCATCTTGGACGCAGCTCGAACCATCGAAAAGTAAATCGCATGAAGATGATAGGGACTCCGAGTTTGAAAGAGACAGAAACAGCTCTCGTAAGAGGATTCACCGTTCATCATTGCCTCAAGTATA 1157 0.4097 MSSDSAKENASVVDSSVTEWKQDIGNSDDPESSSYKANENSGPTRADKKGCSHRQRGVPTGFETEKGIWATQIMNEPILEEAFHNSIRVILIFSVNMSGSFQGYAQMMSPIGWRRDNVWSEGSSNSNPWGRSFKVKWLQLNNLPFHKTLHLKNPLNDYKPVKISRDCQELSRDVGEALCELLDVENDVDGLLSSSSSSRDGFSLKGNSAETPSSMADEDRNFPPLNMSWSMPMPYPSLPYQNQAELNKYHSANQRFCWTTFDEALPITSGLSKVAGTKRSHFSGQIPKLQVDRDVGSQFDVWGLSAESPLASTLTDDDFLDMSYEEYLEVHSRCRKQLRFNAAIPSWTQLEPSKSKSHEDDRDSEFERDRNSSRKRIHRSSLPQV 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00240 385 ProSiteProfiles YTH domain profile. 47 182 IPR007275 GO:0003723
Bva08g00240 385 MobiDBLite consensus disorder prediction 1 41 - -
Bva08g00240 385 MobiDBLite consensus disorder prediction 193 215 - -
Bva08g00240 385 Pfam YT521-B-like domain 65 182 IPR007275 GO:0003723
Bva08g00240 385 Gene3D ph1033 like domains 63 193 - -
Bva08g00240 385 MobiDBLite consensus disorder prediction 349 385 - -
Bva08g00240 385 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 9 304 IPR045168 -
Bva08g00240 385 MobiDBLite consensus disorder prediction 1 59 - -
Bva08g00240 385 PANTHER YTH DOMAIN-CONTAINING PROTEIN 1 9 304 - -
Bva08g00240 385 MobiDBLite consensus disorder prediction 193 218 - -
Bva08g00240 385 MobiDBLite consensus disorder prediction 353 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00240 Bva-Chr8 1158599 1161684 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00240 K20100 - gmx:100784130 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00240 08 1158599 1161684 Bva08g00240 08 1158599 1161684 ECH