Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00225 ATGGCTGCCTCGTCGTGGCGGaggcttttcctttttgctgcTCTTCTCTTGACCCCTCAAAATTGTGTTTGTGCCTCTCAAAAagATACAGATGGAGTTCCAAAGTACAAATTTATGCAGGAAGCAACCTCAGCTCCCAACATTTCTTATTACGACTACATTGTCATTGGGGGAGGTACAGCGGGCTGCCCTTTGGCAGCAACCCTGTCTCAAAACTACAGCGTTTTGCTACTTGAACGGGGTGGATCTCCTTATGGGAACCCCAACATCACCAATTTAGGTGCTTTCGGAGCAGCGTTGTCGGACACGTCCCCGACCTCACCCTCGCAGCGTTTCATCTCCGAAGATGGTGTCATCAACTCAAGAGCTCGCGTGCTTGGTGGCGGAAGCTGTTTGAACGCCGGTTTCTATACTCGTGCAAGTCCTCAGTACGTAAgGGAAGCCGGCTGGGATGGGAGGACAGTAAACGAGTCGTACGAATGGGTGGAGAAGGTTGTGGCTTTCGAGCCATCGTTGCGGCAGTGGCAGTCGGCTGTGCGAGATGGTCTCTTGGAAGTTGGCGTGCTTCCCTTCAACAGCTTCACTTACGATCACATGAATGGTACCAAGATTGGCGGCACCATTTTTGACCAAAATGGCCACAGGCACACTGCTGCTGATCTCTTAACACAAGCCAATCCCACCAAAATCACTGTCTTTCTACATGCCACCGTCCGTAGAATCCTCTTCCGCGCAAGTAGGAGGCCCATCGCCCGTGCCGTAGTATTTGGCGATGCCTTAGGGGTCAAGCACAAGGCTTATCTCAAGCGTGGGCCCTCCGCCGAAATTATAATATCAGCGGGTGCACTTGGAAGCCCACAACTTCTAATGTTGAGTGGAGTTGGTCCTGCGCAACACCTGGGGGCCCATAACATTAGTGTTGTAGTGGACCAGCCCATGGTAGGACAGGGAATGTCGGATAACCCAATGAACGCCGTCTTTATCCCCTCCCCTGTCCCCGTTGAGCTCTCTCTCATTCAGGTCGTCGGAATCACCAACTCTGGAACATACATTGAAGCTGCCAGCGGTGCAAATTTCGCCGGTCGTACTTCTACTTCCAGTAGAGACTACGGCATGTTCTCCCCCAAGgTTGGTCAATTGTCCAAGTTGCCACCGAAGCAAAGGACTCCAGAGGCCCTTGCAAAAGCCATACAACTCATGGATAGCCTAGACGAGGCCGCTTTCAGAGGCGGATTCATCTTAGAGAAAATTATGGGCCCAACTTCAAGGGGCCATATGGAGCTCCGAACCCGCAACCCGAACGACAATCCGTCCGTCACATTCAACTACTTCCAAGACCCTCGAGATTTGGAGAGATGTGTAAAAGGCCTTAGCATCATTGAGAGAGTGATAGAGTCGGAGGCATTCTCCTCGTTCAGATACCAGAATCTATCAGTGCCAACGCTGCTCAACATGACTGCGAATTCCCCAGTTAACTTGCTGCCTAAGCATATGAATGCTTCAATGTCTTTGGAGCAGTATTGCAGGGACACAGTGATGACCATATGGCATTATCATGGCGGCTGCCAAGTTGGGAGAGTCGTTGATTCTGATTACAAGGTGCTTGGTGTCGACGCACTACGAGTCATTGATGGTTCcacttttaattattctcCTGGAACTAATCCTCAAGCCACTGTTATGATGCTTGGAagATATATGGGACTCAAAATATTGAGACAGAGGCTAGCTGTGGATGAATCAAAGTG 1748 0.4949 MAASSWRRLFLFAALLLTPQNCVCASQKDTDGVPKYKFMQEATSAPNISYYDYIVIGGGTAGCPLAATLSQNYSVLLLERGGSPYGNPNITNLGAFGAALSDTSPTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRASPQYVREAGWDGRTVNESYEWVEKVVAFEPSLRQWQSAVRDGLLEVGVLPFNSFTYDHMNGTKIGGTIFDQNGHRHTAADLLTQANPTKITVFLHATVRRILFRASRRPIARAVVFGDALGVKHKAYLKRGPSAEIIISAGALGSPQLLMLSGVGPAQHLGAHNISVVVDQPMVGQGMSDNPMNAVFIPSPVPVELSLIQVVGITNSGTYIEAASGANFAGRTSTSSRDYGMFSPKVGQLSKLPPKQRTPEALAKAIQLMDSLDEAAFRGGFILEKIMGPTSRGHMELRTRNPNDNPSVTFNYFQDPRDLERCVKGLSIIERVIESEAFSSFRYQNLSVPTLLNMTANSPVNLLPKHMNASMSLEQYCRDTVMTIWHYHGGCQVGRVVDSDYKVLGVDALRVIDGSTFNYSPGTNPQATVMMLGRYMGLKILRQRLAVDESK 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00225 582 Gene3D - 51 564 IPR036188 -
Bva08g00225 582 Pfam GMC oxidoreductase 51 322 IPR000172 GO:0016614|GO:0050660
Bva08g00225 582 PANTHER OSJNBA0019K04.7 PROTEIN 18 576 - -
Bva08g00225 582 ProSitePatterns GMC oxidoreductases signature 2. 281 295 IPR000172 GO:0016614|GO:0050660
Bva08g00225 582 Gene3D - 168 514 - -
Bva08g00225 582 SUPERFAMILY FAD-linked reductases, C-terminal domain 318 521 - -
Bva08g00225 582 PIRSF Alcohol_oxidase 31 581 IPR012132 GO:0050660
Bva08g00225 582 Pfam GMC oxidoreductase 420 565 IPR007867 GO:0016614
Bva08g00225 582 SUPERFAMILY FAD/NAD(P)-binding domain 50 573 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00225 Bva-Chr8 1089001 1092612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00225 10 577 Miscellaneous Gene Families AT3G56060 57.068 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00225 - - gmx:100796752 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00225 08 1089001 1092612 Bva08g00225 08 1089001 1092612 ECH