Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00216 ATGTGCAAGTTACCATCTTCGTCTGCTCTCTGTGAATGCAATATGGAGGACCCAAATCAGTCCTCAAACAAATTACAAGAGCCCGACATATCCACCCCTTTGATTCCCAATTCCCCAACATTTCAACGGCAAAACCAAAAGCCCCACAAAGATAAAACCCATTTATCTCTGGCACTCAATGAAGCCAGGTGTATAGCCCACATCGCATTTCCTATGGTGTTAACTGGTCTGCTACTTTATTCTCGCTCCGTGATTTCCATGCTCTTCCTGGGTCGTCTCGGTGAGCTTGCTTTGGCTGGCGGTTCTCTTGCCATTGGTTTTGCTAATATCACCGGTTACTCTGTTCTCTCTGGCCTTGCCATGGGGATGGAACCCATATGTGGTCAGGCTTTCGGAGCAAAAAGATTCAAACTTTTAGGCCTTGCACTGCAGAGAACAGTGGTTCTGCTTCTTTTAACTTCGGCAGTCATATCATTTCTGTGGCtcaatatgaagaaaattttgcttcTCTGTGGTCAAGAAGAGGATATCACCGCCGAAGCTCATTCTTACATTCTTTATTCACTTCCTGATCTTATAGCACAATCAATATTACACCCTTTGCGAATCTATTTGCGAAGCCAATCGATAACCTTACCTCTAACATTCTGCGCCGCTCTGTCTATTGTTCTCCACGTTCCCATTAATTACTTCCTTGTCTCTGTTCTTGGGCTTGGAATCAGAGGCATCGCTTTAGGTGCCGTTTGGACAAATTTCAATCTTGTAGGTTCATTGATTATTTACATCATGGTCTCCGGGGTACACCGCAAGACTTGGAGCGGGATTTCCTTAGAATGCCTCAAAGGGTGGAAGTCACTCCTGAATTTAGCCATTCCAAGCTGCATTTCAGTTTGCCTGGAATGGTGGTGGTAcgaaattatgattttattgtgCGGATTATTGATTAATCCCCAAGCAACCGTTGCTTCTATGGGGGTTCTGATTCAAACGACGGCGTTGATATACATTTTCCCTTCCTCTTTGAGCTTTAGTGTATCTACTAGAGTTGGAAATGAACTGGGTGCTAATAGTCCCAAGAAAGCAAAACTAGCAGCCATTGTTGGTCTCTGTTTTAGTTTCGTTCTTGGGTTTTCAGCATTGTTTTTTGCTATTTCGGTGAGGAAGGTCTGGGCTTCCATGTTCACACAGGACGCAGAGATCATAGCTTTGACGTCAATGGTCTTGCCCATCATTGGACTTTGTGAACTTGGAAACTGTCCACAAACAACGGTTTGTGGAGTTCTGAGGGGAACGGCGAGGCCAAAACTGGGAGCAAACATTAATTTAGGTTGCTTTTATCTTGTGGGAATGCCGGTTGCAGTGTGGTTGGGTTTCTATGCAGGGTTCGACTTTGAAGGCCTGTGGCTGGGCCTTTTGGCTGCTCAAGGCTCGTGCATGGTCACCATGCTGTTCGTGTTGGCTCGGACAAATTGGGATGGTCAAGCACAAAGAGCAAAGGAGCTCACGTCATCAGAGGAAGACGAAGAAGTCGATGTTGAGAAAGCGAATCACAAGGATCAAACAGAGAGAGGAAACTCTGTTTCCAGTTTATGCAATAATTTGGACGACTCTGATTTGTTAGTTTG 1625 0.4418 MCKLPSSSALCECNMEDPNQSSNKLQEPDISTPLIPNSPTFQRQNQKPHKDKTHLSLALNEARCIAHIAFPMVLTGLLLYSRSVISMLFLGRLGELALAGGSLAIGFANITGYSVLSGLAMGMEPICGQAFGAKRFKLLGLALQRTVVLLLLTSAVISFLWLNMKKILLLCGQEEDITAEAHSYILYSLPDLIAQSILHPLRIYLRSQSITLPLTFCAALSIVLHVPINYFLVSVLGLGIRGIALGAVWTNFNLVGSLIIYIMVSGVHRKTWSGISLECLKGWKSLLNLAIPSCISVCLEWWWYEIMILLCGLLINPQATVASMGVLIQTTALIYIFPSSLSFSVSTRVGNELGANSPKKAKLAAIVGLCFSFVLGFSALFFAISVRKVWASMFTQDAEIIALTSMVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVGMPVAVWLGFYAGFDFEGLWLGLLAAQGSCMVTMLFVLARTNWDGQAQRAKELTSSEEDEEVDVEKANHKDQTERGNSVSSLCNNLDDSDLLV 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00216 541 MobiDBLite consensus disorder prediction 18 49 - -
Bva08g00216 541 MobiDBLite consensus disorder prediction 18 44 - -
Bva08g00216 541 PANTHER PROTEIN DETOXIFICATION 41 514 - -
Bva08g00216 541 CDD MATE_eukaryotic 61 497 IPR045069 GO:0042910|GO:1990961
Bva08g00216 541 MobiDBLite consensus disorder prediction 500 521 - -
Bva08g00216 541 Pfam MatE 71 231 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva08g00216 541 Pfam MatE 292 455 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva08g00216 541 MobiDBLite consensus disorder prediction 500 541 - -
Bva08g00216 541 TIGRFAM matE: MATE efflux family protein 71 468 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva08g00216 541 PANTHER MULTIDRUG RESISTANCE PROTEIN 41 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00216 Bva-Chr8 1045296 1047273 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00216 K03327 - qsu:112003859 799.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00216 08 1045296 1047273 Bva08g00216 08 1045296 1047273 ECH