Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00196 ATGGCCGCGACCAAGAGcctttccctctctttcttaTCCTTATTTGTGATCGCTCTTTGCTTTACCTCCGCCCGGGCCACCATAATTGACATCACAAACAAATGCAACTTCACGGTGTGGGCTGCCGCCGTACCTGGAGGTGGCAGACAGCTGAACACGAACGAGACATGGGCCCTTGAAGTGGCTTCCAACACCACAGGTGGTCGTATTTGGGCTCGAACCAATTGCACCTTCAACGCAACAGGAGTTGGGCAGTGCCAGTCGGGTGACTGTGGTGGTGTCCTCGAGTGCCAACCCAATACCACAGTCACACCACCATATACCCTGGCTGAATACGCACTAGACCAATATAACGGTATGGATTTCTATGATATCTCAGCGGTTAATGGATTTAACGTTCCCATAAAGTTGAGTCCAGTGGCAAGTGGCACCCGTGCCATCAATTGCACTTATGACATCAATAACGATTGCCCCAGCGAGCTCAAAGTTGCAGGAGGCTGCAAAAACCCATGCACCGTCTTCAAAACCGATCAGTATTGTTGCACTAATTCAACAACCACCTGTGGACCCACCGATTATTCCAGATTCTTCAAGCAAAGGTGCCCAGAAATTTATACTTACCCTATGGATGATGCCACCAGCACTTTCTCGTGCCAAGGAAGTACCAACTATACGGTTATCTTCTGCCCATG 692 0.4841 MAATKSLSLSFLSLFVIALCFTSARATIIDITNKCNFTVWAAAVPGGGRQLNTNETWALEVASNTTGGRIWARTNCTFNATGVGQCQSGDCGGVLECQPNTTVTPPYTLAEYALDQYNGMDFYDISAVNGFNVPIKLSPVASGTRAINCTYDINNDCPSELKVAGGCKNPCTVFKTDQYCCTNSTTTCGPTDYSRFFKQRCPEIYTYPMDDATSTFSCQGSTNYTVIFCP 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00196 230 SUPERFAMILY Osmotin, thaumatin-like protein 27 230 IPR037176 -
Bva08g00196 230 ProSiteProfiles Thaumatin family profile. 26 230 IPR001938 -
Bva08g00196 230 PANTHER OS03G0233200 PROTEIN 8 230 IPR001938 -
Bva08g00196 230 Pfam Thaumatin family 33 230 IPR001938 -
Bva08g00196 230 PRINTS Pathogenesis-related protein signature 69 80 IPR001938 -
Bva08g00196 230 PRINTS Pathogenesis-related protein signature 121 137 IPR001938 -
Bva08g00196 230 PRINTS Pathogenesis-related protein signature 47 56 IPR001938 -
Bva08g00196 230 PRINTS Pathogenesis-related protein signature 220 229 IPR001938 -
Bva08g00196 230 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Bva08g00196 230 Gene3D Thaumatin 27 230 IPR037176 -
Bva08g00196 230 SMART tha2 29 230 IPR001938 -
Bva08g00196 230 PANTHER THAUMATIN-RELATED 8 230 - -
Bva08g00196 230 PIRSF PR5 1 230 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00196 Bva-Chr8 962165 963066 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00196 4 230 Receptor kinase-like Gene Family AT5G38280 35.060 4.83e-43 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00196 - - gmx:100301882 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00196 08 962165 963066 Bva08g00196 08 962165 963066 ECH