Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00194 ATGCTGGTTTCTTCACGAATCACTTCAATTAGTCCCAAAATGACTATCATCAAAAGTCTCTCTAACATGACGTTCCTTGCAATTGCTCTCTGCCTCAGTTCCGCCATTACCCAAGCTGCAAGATTCAATGTAACAAACACATGCCCCTTCACTGTATGGGCCGCAGCCGTGCCTGGCGGCCCTAGCGGGGGCAAGCAGCTCAACTCCGGCGAGTCTTGGGCCATTGACGTGGCTGCCGGCTCTCAAAATGCTCGCATTTGGGCCCGAACAGGTTGCAGCTTTGATGAATCTGGGCGTGGCCGATGCGATACTGGTGACTGTGGGGGTCTGCTAGAGTGCCAAGAACATGGTACACCCCCGAACACCCTTGCTGAATATTCATTAGATCAGTTGAACAGCAGCAATTCGGACTTCTTCTATATCTCACTCATGGAGGGTTTTAACGTCAAAATGGAATTTAGTCCAACATCTGATGGGTGCCCCCGAGGCATAACATGCAACGCTGATATCATCCAACAATGCCCCAGTGAGCTGAGGACACAAGGAGGTTGTAATAATCCATGTACTGCGTTCAAAACAGATAAGTACTGTTGCAATTCAGGAAGTTGTAGACCTACCGGttactctaatttcttcaagaaTAAGTGCCCTGATGCGTTTACTTACCCTAAGGATGACAGCTTATTCATGAATTGCCCCGGAGGAACCAACTATAAGGTTGTCTTTTGCCCCTG 734 0.4768 MLVSSRITSISPKMTIIKSLSNMTFLAIALCLSSAITQAARFNVTNTCPFTVWAAAVPGGPSGGKQLNSGESWAIDVAAGSQNARIWARTGCSFDESGRGRCDTGDCGGLLECQEHGTPPNTLAEYSLDQLNSSNSDFFYISLMEGFNVKMEFSPTSDGCPRGITCNADIIQQCPSELRTQGGCNNPCTAFKTDKYCCNSGSCRPTGYSNFFKNKCPDAFTYPKDDSLFMNCPGGTNYKVVFCP 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00194 244 Gene3D Thaumatin 40 244 IPR037176 -
Bva08g00194 244 CDD TLP-P 42 244 - -
Bva08g00194 244 PANTHER PROTEIN P21 20 244 - -
Bva08g00194 244 PANTHER OS03G0233200 PROTEIN 20 244 IPR001938 -
Bva08g00194 244 ProSitePatterns Thaumatin family signature. 98 113 IPR017949 -
Bva08g00194 244 PRINTS Pathogenesis-related protein signature 85 96 IPR001938 -
Bva08g00194 244 PRINTS Pathogenesis-related protein signature 234 243 IPR001938 -
Bva08g00194 244 PRINTS Pathogenesis-related protein signature 63 72 IPR001938 -
Bva08g00194 244 PRINTS Pathogenesis-related protein signature 98 127 IPR001938 -
Bva08g00194 244 PRINTS Pathogenesis-related protein signature 41 53 IPR001938 -
Bva08g00194 244 SMART tha2 42 244 IPR001938 -
Bva08g00194 244 PIRSF PR5 2 244 IPR001938 -
Bva08g00194 244 SUPERFAMILY Osmotin, thaumatin-like protein 40 244 IPR037176 -
Bva08g00194 244 Pfam Thaumatin family 46 244 IPR001938 -
Bva08g00194 244 ProSiteProfiles Thaumatin family profile. 39 244 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00194 Bva-Chr8 957112 957846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00194 19 244 Receptor kinase-like Gene Family AT5G38280 33.200 3.37e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00194 - - gmx:100301882 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00194 08 957112 957846 Bva08g00194 08 957112 957846 ECH