Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00192 ATGAAATGGTTTCTCAGTGTGAATGGTTACTCTAACTCTAAAGTGCCACCAAGTCACGGACAAGGCCAGGAACATAAATTGCTTTCTAAACAAaTTGTCGTGAAAGCAAATGAACGTCCTGAATGGTTACCTGATGTGTGGATTGTGGATGTCAGAACTCGAAAAAGTGGTGTACATATGGGATCCGAGTATAAGTGTTACATTGAACCATCAAATGGACACAGATTCTACTCCAAACCAGAGGTGTTACGGTATCTTGAAACTGTAAAAGGCAATAGCTGCACTTCcaagaaggagaagagatgCACCAATTTGAATTCTACAGGCAAACCGGCATCCACAGCCAAAAGACAGAAACCAAAGTGGTCTGCAACCATACGACAGCTTTTTGTAGGCGAAGAAATATCCTATGAAAGCAGCTTAGAGTTGCTGGATGCTCACAGCTCAAAAGGAGTACTAGATATGTCTGTTGAAATTATTGCTGCTCCTGTTCGTGCTGATGAAACTGTTGTCAACTTGCATTCACAAGGGGATGCAGCTGTAAACCCTCCTGACACAAACGAAAAATCCAATCCAGCTGATGTGCAAGAGAACTTGGAGAATGGTTGTGTTGCCGACGGGGAGGAGAATagtaataaaaagaatcaagGTAATCCTAGCGTATctagaaacaagaaacaattcAGTGCTCCTCACCGGTTTTCAAAACGACTTGCTGGGATTGAACCTAGCCTGGAGGCTGACACTGGGGGCCATGAACGGGCCCTTCAAGTTCCAAAGAGAAACACGAGGAAAAGCATAACCACAAATGCTGATTTAGCCAATAAATCGTCTCGGCAGTTCAATGTTGTCCCACAAATTGAAAACGTGCACAGTGCTTCTTGTATAAACAAGGCAATGCAAGGTGAACCACTAAGCAAATGCCACAAGCCTTCTGAAGACGAAGGAGTTTCCAGAGAGCAACAACATCAACtgaaaacagagaaaatagATGACAATAATCCGGAACAACTTCATTATTCTCTATCTCAGGATTCTAGCTTACCAGGCATCAATGTGGCAATGAAGTCCGTCATTACTGGTGAATTCCCAATTCTGGATAACCCTGCCAGTGGTCACAGTTTGACTTCTGAAGCTTCCGCCCTAAAAGAAAACGAATTGCATGTGAGTATGATTGGAAAAAGTGGGGATCGGAAAATTCATGCTCGCTTGAACAAATCAagtaataagaaaaaacagGGCATGCCTTGTCGGGCTTCAAAACGATTAGCTGGAGTTGAACCTGAGCTGAAGAACGACTCCATATACAGTGAAAAGCCTCCTGAATATAAGAGCAGAAAGTCTAAAGGTGAAGTCAATAAAGTAGCTCATCAAAATCATGATCCTGCTAAGATAAGTGCACCAATGAATGGAGAGTCTCTAGAAAAAAGTAGAAAGTCTCCTAATGTACCAGATATTACTGACAAGCCAGTGGAAAGGGATGGAGATAAAGAAAGTTATAATGAAAAATCAGGCCATCAACTGTCCTTTGCCTTCCAATATTCTTGGTCAGATCCATGCTTAGAGTTTGCAATTAAGACCCTCACAGGTGTGTTACCAATTGAGCATACAGTTGGAAATGGGGCTAATTTCGTCCCTGGAAGTGACAGCAGTGCAAAAAGCAATAGGGAAAGAAATTCACAGGTAAATTCGAAGAAACgcaagaccaagaaagagcTTAAATTGCCTCGCAGGCTGTCAAAGCGACTTGCTGGCCATGAACCTGAGCTAGTACCTGCTGAAAGACCTCTCGAATATGCCACTAGAAAATCGCACAAAGATGAAGCAACTGCAAATGTGCTTTTGAACAATGGAGCATCTAAGCATCTTTACGCTAGCTATGAAATCCAAACTGTTCCTGAGGAGAAACTGCAGAAGCCTGAAGCTGAAAAGATTGGTAATCAGAGGTCAAATGTGAGTTTGAACAAGGGAACATCTGAGCATCTTGGTACTAGCAAAGAAACAGACCATAGTGTTCATGCATCTTACTCTTCTGAAACGACAGTATATAGAGAACCATTGAACAAGAGTGAGAAGCCACATGAAGCCCAAATAGTTCCTGAGGAGCGTCTGCAGAAGCCTGAAGCTGGAAAGGTTGGTGATCAGAGGTCAAATGTGAACATGAATGATAGAGCTTCTGAGCATCTTGACACTATTAAAGAAATAGATAATATTGTCCGTGCATCTGACAGTTCTGAAACAAGAAGAGCAGTTAGAGAACCATTGAACAAGAGTGAGAAGTCACACGAAGCCCAAACTATTCCCGAGGAGCAACTGCAGAAGCCTGAAGCTGAAAAGTTTGCTGATCAGAGGTCAGAGCCACATCTGTCCCCGTTTGGGAACTCTTGGTCAGATCCATGCCTAGAATTTGCATTCAAGACCCTCACAGGTGCATTGCCAGTAGAAGCTACTGCTGACGTTTTTCCTATAATGTCTACCAGTGTTAGTGGCCCACCAGATCAGGATTTGCTGGAGAGTGTGGTAGAGAATAGCGTTAACGAAGTCCATGATAACTCGAAACAATCCGATAACAAGAGAGAGTTCAATTTGTTTTGGGAGCCTTCAAAACAAAACCTGCGGCAACCTGAGTTTTGTACCAAATCAGCATCTTGTGAGAATTCTTCGAACTTCGCCACTGCAGAGTCCTACTTTGATGAAGGCTATTATGTAACAGGGAATTTGGATGAAGGAAATCCTGTAAATATTGAAGTTGGGAATATGATACAACTTAATCATCATTCTAGAAATATCAACATGTTTAGTCACGAAGAGCCAGCAAAGAATTTTGGACAGGTCCTTCAGGGTAACGCTGTTCCAGCAGAGCAATCACAACTCGAAACTCTAAACAGTGAGAACCCTGATTCACATTTTTGTGCTCCATTTATGGATTCTTGGTCAGACCCATGTCTAGAATTTGCATTTAAGACTCTTACTGGAGCAATACCGTTACCGGTGGAGGAAAATTTAGCAATACAAGGAAGTTTCCCGGGACCTGCTAACTGTCATGGCCGGGGGGATGGCGGCTCAACATTGCCAGATTTTGTATCTCCCAGCTTTTCTCAAAGTGATATCTCATCCCACCATGATATGGGGAAGTCCATTCCAGGGCTGCAGCCATCAATGGGTTTTTCATTCCTACCTCGGGAAAATGTCAGCGTGCATAATGGTTCTGGTGTTGATTCTTGGAAATCGTACCCTCATtacaataagaaatttta 3257 0.4145 MKWFLSVNGYSNSKVPPSHGQGQEHKLLSKQIVVKANERPEWLPDVWIVDVRTRKSGVHMGSEYKCYIEPSNGHRFYSKPEVLRYLETVKGNSCTSKKEKRCTNLNSTGKPASTAKRQKPKWSATIRQLFVGEEISYESSLELLDAHSSKGVLDMSVEIIAAPVRADETVVNLHSQGDAAVNPPDTNEKSNPADVQENLENGCVADGEENSNKKNQGNPSVSRNKKQFSAPHRFSKRLAGIEPSLEADTGGHERALQVPKRNTRKSITTNADLANKSSRQFNVVPQIENVHSASCINKAMQGEPLSKCHKPSEDEGVSREQQHQLKTEKIDDNNPEQLHYSLSQDSSLPGINVAMKSVITGEFPILDNPASGHSLTSEASALKENELHVSMIGKSGDRKIHARLNKSSNKKKQGMPCRASKRLAGVEPELKNDSIYSEKPPEYKSRKSKGEVNKVAHQNHDPAKISAPMNGESLEKSRKSPNVPDITDKPVERDGDKESYNEKSGHQLSFAFQYSWSDPCLEFAIKTLTGVLPIEHTVGNGANFVPGSDSSAKSNRERNSQVNSKKRKTKKELKLPRRLSKRLAGHEPELVPAERPLEYATRKSHKDEATANVLLNNGASKHLYASYEIQTVPEEKLQKPEAEKIGNQRSNVSLNKGTSEHLGTSKETDHSVHASYSSETTVYREPLNKSEKPHEAQIVPEERLQKPEAGKVGDQRSNVNMNDRASEHLDTIKEIDNIVRASDSSETRRAVREPLNKSEKSHEAQTIPEEQLQKPEAEKFADQRSEPHLSPFGNSWSDPCLEFAFKTLTGALPVEATADVFPIMSTSVSGPPDQDLLESVVENSVNEVHDNSKQSDNKREFNLFWEPSKQNLRQPEFCTKSASCENSSNFATAESYFDEGYYVTGNLDEGNPVNIEVGNMIQLNHHSRNINMFSHEEPAKNFGQVLQGNAVPAEQSQLETLNSENPDSHFCAPFMDSWSDPCLEFAFKTLTGAIPLPVEENLAIQGSFPGPANCHGRGDGGSTLPDFVSPSFSQSDISSHHDMGKSIPGLQPSMGFSFLPRENVSVHNGSGVDSWKSYPHYNKKF 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00192 1085 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 33 110 IPR001739 GO:0003677
Bva08g00192 1085 MobiDBLite consensus disorder prediction 393 502 - -
Bva08g00192 1085 MobiDBLite consensus disorder prediction 721 785 - -
Bva08g00192 1085 MobiDBLite consensus disorder prediction 669 684 - -
Bva08g00192 1085 MobiDBLite consensus disorder prediction 208 228 - -
Bva08g00192 1085 Gene3D - 12 128 - -
Bva08g00192 1085 PANTHER OS04G0193200 PROTEIN 384 537 - -
Bva08g00192 1085 PANTHER OS04G0193200 PROTEIN 12 108 - -
Bva08g00192 1085 PANTHER OS04G0193200 PROTEIN 116 388 - -
Bva08g00192 1085 PANTHER OS04G0193200 PROTEIN 384 537 IPR038945 -
Bva08g00192 1085 PANTHER OS04G0193200 PROTEIN 551 723 IPR038945 -
Bva08g00192 1085 PANTHER OS04G0193200 PROTEIN 721 1076 IPR038945 -
Bva08g00192 1085 MobiDBLite consensus disorder prediction 638 793 - -
Bva08g00192 1085 MobiDBLite consensus disorder prediction 538 574 - -
Bva08g00192 1085 SUPERFAMILY DNA-binding domain 39 94 IPR016177 GO:0003677
Bva08g00192 1085 MobiDBLite consensus disorder prediction 204 273 - -
Bva08g00192 1085 PANTHER OS04G0193200 PROTEIN 12 108 IPR038945 -
Bva08g00192 1085 PANTHER OS04G0193200 PROTEIN 116 388 IPR038945 -
Bva08g00192 1085 PANTHER OS04G0193200 PROTEIN 551 723 - -
Bva08g00192 1085 PANTHER OS04G0193200 PROTEIN 721 1076 - -
Bva08g00192 1085 MobiDBLite consensus disorder prediction 543 558 - -
Bva08g00192 1085 MobiDBLite consensus disorder prediction 478 502 - -
Bva08g00192 1085 MobiDBLite consensus disorder prediction 307 335 - -
Bva08g00192 1085 MobiDBLite consensus disorder prediction 304 338 - -
Bva08g00192 1085 MobiDBLite consensus disorder prediction 1015 1046 - -
Bva08g00192 1085 Pfam Methyl-CpG binding domain 37 98 IPR001739 GO:0003677
Bva08g00192 1085 MobiDBLite consensus disorder prediction 644 661 - -
Bva08g00192 1085 MobiDBLite consensus disorder prediction 424 458 - -
Bva08g00192 1085 MobiDBLite consensus disorder prediction 685 710 - -
Bva08g00192 1085 MobiDBLite consensus disorder prediction 1026 1041 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00192 Bva-Chr8 944901 950563 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00192 - - lang:109332897 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00192 08 944901 950563 Bva08g00192 08 944901 950563 BWGD
Bva08g00192 08 944901 950563 Bva08g00192 08 944901 950563 ECH