Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00188 ATGGGAATAGGAACCAGCAACTTTGTAATCAGATGGATCAACTTTCTGACCAtgCTATTGGCTATTGCAGTGATAGTATTTGGGGTCTGGATGAGCACTCATCATGATGGCTGTCGAAAGTCCCTCACCTTGCCTGTGTTAGGACTTGGAGCATTCATCTTCTTAATaTCCATAGTCGGTTTCTTGGGTGCTCTGAAAAATAGTTCCATACTGTTATGGCTTTATCTGATCCTGCTGTGCTTCATCTTGGTGGGGATTCTGGTTTTCACAGTGTTGGCGTTCATCGTGACTAATAATGGATCAGGTCATAGTGTGGCTGGCTTGAGGTACAAGGAGTATCACTTGCAAGATTACAGTTCATGGTTTCTTAAACAGtTAAACAATTCTCATAATTGGGAGCAGCTGAGGAATTGCCTGGTCAAATCTGACGACTGCAACAACCTATCTAAAAAATACAAGACTctcaaagaatataaattagcTAAATTGACTCCAATTGAGGCTGGCTGTTGTCGACCACCTTCGCAATGTGGATATCCTGCTGGAAACGCATCGTACTATGATTTGAGCTTTCACCCAGTTAGCCCCAACAATGACTGCAGAAGATACAAAAATTCTTGGGCCACCAGATGCTACGATTGTGATTCCTGCAAGGCCGGTGTTGCACAATACATGAAAACTGAGTGGAGAGTGGTTGCAATATTCAATGTTGTCTTATTCGTTGTCTTGTCGATGATATACTTTGTGGGATGCTGTGCAAGACGAAATGCTGCCAGGAGTCACTCCAAGGCTTG 794 0.4232 MGIGTSNFVIRWINFLTMLLAIAVIVFGVWMSTHHDGCRKSLTLPVLGLGAFIFLISIVGFLGALKNSSILLWLYLILLCFILVGILVFTVLAFIVTNNGSGHSVAGLRYKEYHLQDYSSWFLKQLNNSHNWEQLRNCLVKSDDCNNLSKKYKTLKEYKLAKLTPIEAGCCRPPSQCGYPAGNASYYDLSFHPVSPNNDCRRYKNSWATRCYDCDSCKAGVAQYMKTEWRVVAIFNVVLFVVLSMIYFVGCCARRNAARSHSKA 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00188 264 PANTHER TETRASPANIN-8-RELATED 1 263 IPR044991 GO:0009734|GO:0016021
Bva08g00188 264 PRINTS Transmembrane four family signature 66 94 - -
Bva08g00188 264 PRINTS Transmembrane four family signature 8 31 - -
Bva08g00188 264 PRINTS Transmembrane four family signature 39 65 - -
Bva08g00188 264 Pfam Tetraspanin family 7 253 IPR018499 GO:0016021
Bva08g00188 264 PANTHER TETRASPANIN-10 1 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00188 Bva-Chr8 928500 931327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00188 6 262 Miscellaneous Gene Families AT2G23810 37.692 4.30e-65 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00188 - - qsu:112038236 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00188 08 928500 931327 Bva08g00188 08 928500 931327 ECH