Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00180 ATGGAGGACGTCGCGGTGTCAGGTATATCCACGTCTCCAGCTCCATGCTGGAGTAACGTAGTGAAGAATCAAACGGCTCCAATGCCTCGTGATGAAAACTCACTCCAGACAAGCCGAGTATTGGTGGAAAGCTGCAAATCCAGTAACGGTATATCAGTGGCTGTTGTGGACGCGAATGCCATTATCCAAGGGGAAGAGAAGCTGCACAACATCGCCGATAAATTCGTCTCTATCCCAGAAGTCATGGAGGAAGTTCGAGACCCCGTCTCACGCCACAGGCTCTCCTTCCTTCCATTCACTGTCGAAACCACGGAACCCTCCCCAGAAGCCATTAATAAAGTTATCAAATTTGCAAGGGCTACTGGTGATCTGCAGACCCTTTCGgatgttgatctcaaactcaTAGCTTTAGCTTACACGTTAGAGGCTCAAATCCATGGAACAAAACATCTCAGGGATTGCCCTCCTCCTGTTCAAACGGTAAATGTTAAGAGGTTACCCGAGAAGGACATGCCAGGATGGGGTAACAATGTGCCTAATTTGCAAGAGTGGGAAGCATTAGAACAAGAAGTTGAGGACAAATCAAATTCCAATTCAAGAATTCTTCCCTTGCAAGATTTTAACTTGAATGTTATTCATCAAGATGACCACTCCGAAGATGGTTCAGCGGGGATGAAGAGTGAAGCTCCTTCTGAAAATCAAGAGGGTGGTGACTGTAGTTCAGATAAACTTAAGAAATATTTACCTAAGAAAAAGGAGATAAACATTGAAGGGAAGAAGATGGTGGCTGATGGAATTGATGCATCCCAAGGACAACTTGATGATAATGCTTGTAATTGGATGCCTGCTGTCAGCCGAAGTACTCATAGGAGATACCTGCGAAGGAAAGCTAGACGAGAGTACAATGAGGCATTATTGCAGAATCAATATCAGCAAGATTTGGAGGAAAGTATTGATGGTAGTGTTGATGGGGATGCTAGCAATCCAAATCACCTTCTGCATCAAAGTGATGAAGAAAAACATATCGAAAATGGTGTTTCTGAGAATGATCGGATAATAGAAGAGAAGGAAGGCAGTGATAATATCTCTGCACTTCTGAAGCAAATGGGCATAGAAGAAGGCTCATCTCAAGCTCTTGATGAAGAAAAGCAGTTGGATTTATCTTCAGCGGAACCACAGTCAAATGATTCTAGATTACTTGGAACCACATCTGATGCCAATGCAACTGTGGCCCCTAATCTGTGTGAGGCGGACACAGACAATGACAGATCAAATCACGTGGAGATTGCAAACCAGACCTGTGAAGCTTCTGATATTTCATATGCCGAAGATGATGGCAGTGAGCAAAGTTGGATGCTTAGATCTTTGTCTGAGTCAAGTGTAGCCTGCGTAACTGGTGACTTTGCAATGCAAAATGTTCTGCTCCAAATGGGTTTGCGATTGCTGGCACCTGGAGGAGCACAGATACACCGACTTCACAGGTGGATACTTAAGTGTCATGCTTGCTATACTGTTACTCCTGAAATTGGGAGGATTTTCTGCCCGAAATGTGGAAATGGTGGCACCTTACTCAAGGTAGCTGTTACTGTTGGTGAAAACGGAATAGTATTAGCTGCTCGTCGTCCACGGATCACATTGCGTGGTTCAAAGTTTTCATTGCCTTTACCCCAAGGCGGAAGGGACGCAATCACAAAAAATCTCGTTCTACGTGAAGATCAGCTTCCTCAAAAGTTGCTATATCCtaaaacgaagaagaaagctaATAAGCAGGACGATGATTTCTTCAGTTCAGACAACATCTTCAGCCATCATACTGATAAGAGAGCTCCCTTTCAGCCCCCTGTAAGGAAAGCATTAGCAGTTTTCAGCGGAAAGAGAAATCCCAACGACAATCACTTCTCACGCTCCACGCATAAGTA 1919 0.4356 MEDVAVSGISTSPAPCWSNVVKNQTAPMPRDENSLQTSRVLVESCKSSNGISVAVVDANAIIQGEEKLHNIADKFVSIPEVMEEVRDPVSRHRLSFLPFTVETTEPSPEAINKVIKFARATGDLQTLSDVDLKLIALAYTLEAQIHGTKHLRDCPPPVQTVNVKRLPEKDMPGWGNNVPNLQEWEALEQEVEDKSNSNSRILPLQDFNLNVIHQDDHSEDGSAGMKSEAPSENQEGGDCSSDKLKKYLPKKKEINIEGKKMVADGIDASQGQLDDNACNWMPAVSRSTHRRYLRRKARREYNEALLQNQYQQDLEESIDGSVDGDASNPNHLLHQSDEEKHIENGVSENDRIIEEKEGSDNISALLKQMGIEEGSSQALDEEKQLDLSSAEPQSNDSRLLGTTSDANATVAPNLCEADTDNDRSNHVEIANQTCEASDISYAEDDGSEQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGAQIHRLHRWILKCHACYTVTPEIGRIFCPKCGNGGTLLKVAVTVGENGIVLAARRPRITLRGSKFSLPLPQGGRDAITKNLVLREDQLPQKLLYPKTKKKANKQDDDFFSSDNIFSHHTDKRAPFQPPVRKALAVFSGKRNPNDNHFSRSTHK 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00180 639 CDD PIN_Nob1-like 55 166 IPR033411 -
Bva08g00180 639 PANTHER - 9 638 - -
Bva08g00180 639 MobiDBLite consensus disorder prediction 375 405 - -
Bva08g00180 639 SUPERFAMILY NOB1 zinc finger-like 489 552 IPR036283 -
Bva08g00180 639 MobiDBLite consensus disorder prediction 388 405 - -
Bva08g00180 639 Pfam Nin one binding (NOB1) Zn-ribbon like 489 559 IPR014881 -
Bva08g00180 639 Pfam PIN domain of ribonuclease 55 141 IPR033411 -
Bva08g00180 639 MobiDBLite consensus disorder prediction 215 244 - -
Bva08g00180 639 PANTHER RNA-BINDING PROTEIN NOB1 9 638 IPR039907 -
Bva08g00180 639 Gene3D - 45 161 - -
Bva08g00180 639 Gene3D - 483 557 IPR036283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00180 Bva-Chr8 884059 887297 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00180 K11883 - gmx:100800291 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00180 08 884059 887297 Bva08g00180 08 884059 887297 ECH