Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00178 ATGGAAGCAGAGAGCCAAATGGCAAGAGGAAAGTATGCTGCTGATATTTCCACCATAAAGGAAGCACATGCCAGAATCAAATCGTTGGTTCATAAAACTCCAGTTCTGACCTCCGAATCCCTCAATGCTATTTCAGGAAGGCAGCTGTACTTTAAATGTGAATGTTACCAGAAAGGAGGAGCTTTCAAATTCAGAGGTGCCTCCAATGCTGTTTTCTCTCTTGACGATGAGGAGGCGTCTAAAGGGGTCATAACACACAGCAGCGGTAACCATGCTGCTGCATTAGCTCTGGCAGCAAAACTTAGGGGGATCCCTGCATATGTTGTTATTCCAACAAACGCCCCTGCTTGCAAAGTTGAGAATGTAAAGCGTTATGGTGGTCAAATTGTCTGGAGTGAGCCCACTATACCATCAAGGGAGAAAGTTGCTGATAGAATTATGCAAGAAACTGGAGCTACTTTCATACATCCATATAATGATGGACGCATTATGAGTGGCCAGGGTACCATATCCTTAGAGCTTCTGGAGCAAGCCCCGCAAATAGATATGCTAATAGTACCCATAAGTGGTGGAGGTTTAATATCAGGAGTAGCGTTGGCTGCAAAGGCCATCAACCCTGCCATTCGTATTTTGGCTGCTGAACCTAATGGGGCCGATGATTCAGCAAAATCTAAAGCAGCAGGAAGGATAATAAAATTGCCCGAGACCAATACTATAGCTGATGGGCTTCTAGCTTTTCTTGGAGATTTTACCTGGCCTGTAGTGCGAGATCTTGTAGAAGACGTGATAACTGTGGAAGACagtgaaataataaatgcCATGAAACTCTGTTTGGAGATTCTTAAAGTTGTTGCAGAACCAAGTGGAGCGATTGGCCTTGCTGCTGTTCTATCTGACACTTTCCAAAAAAATCCTGCTTGGAAGGATTGTAAACATATAGGAATTATAGTTTCAGGAGGAAATGTTGATCTGGACGTGCTTTGGGATTCTCTCAAGAAGTG 1001 0.4326 MEAESQMARGKYAADISTIKEAHARIKSLVHKTPVLTSESLNAISGRQLYFKCECYQKGGAFKFRGASNAVFSLDDEEASKGVITHSSGNHAAALALAAKLRGIPAYVVIPTNAPACKVENVKRYGGQIVWSEPTIPSREKVADRIMQETGATFIHPYNDGRIMSGQGTISLELLEQAPQIDMLIVPISGGGLISGVALAAKAINPAIRILAAEPNGADDSAKSKAAGRIIKLPETNTIADGLLAFLGDFTWPVVRDLVEDVITVEDSEIINAMKLCLEILKVVAEPSGAIGLAAVLSDTFQKNPAWKDCKHIGIIVSGGNVDLDVLWDSLKK 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00178 333 Pfam Pyridoxal-phosphate dependent enzyme 29 319 IPR001926 -
Bva08g00178 333 Gene3D - 22 323 IPR036052 -
Bva08g00178 333 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 16 326 IPR036052 -
Bva08g00178 333 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 1 39 - -
Bva08g00178 333 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 30 333 - -
Bva08g00178 333 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 IPR000634 GO:0006520|GO:0030170
Bva08g00178 333 Gene3D - 62 158 IPR036052 -
Bva08g00178 333 PANTHER - 30 333 - -
Bva08g00178 333 PANTHER - 1 39 - -
Bva08g00178 333 CDD Thr-dehyd 19 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00178 Bva-Chr8 877387 880413 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00178 K12235 - gmx:100799758 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00178 08 877387 880413 Bva08g00178 08 877387 880413 ECH