Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00173 ATGAATAATCTTAAGTTAGGGGTAGATGTGGTGAGTGCTCACAATCTTCTACCTAAAGATGGCCAAGGTTCTTCTAGTGCCTTTGTGGAACTTTACTTTGATGGTCAGAAGTTCCGTACCACCATCAAAGAAAAGGATCTCAACCCTGTTTGGAATGAGAGCTTCTACTTCAATATATCTGATCCTTCTAATCTTCACTATCTTTCTCTTGATGTCTATGTCCACAACCACGCCAAACCTACGAATTCCAGTTCATTTCTTGGGAAGGTTAGCCTCACTGGGTCTTCTTTTGTTCCTTATTCTGATGCTGTTGTCTTGCACTATCCTTTAGAAAAGCGTGGTATATTCTCTCGTGTAAGAGGAGAAATTGGCCTCAGAGTTTATGTCACCGATGACTCAACCATAAAGTCATCAACACCAGTTGCTGGTGCTGAGTCCACCCCAACAAATAATCCTGGCTCAATTCAGGCAGATACCCATGCACCTGCTAACTCAGTAACAAACACTAATGCAAAGGTTGAATCAAGACACACATTTCATCATCTCCCAAATCCAAACCACCACGAACATCAGcatcaacatcaacatcaTTCTTCTTCCGTTGCAGATACTCGTTATGTAACTAAGTATGAGTCTGATGAAATGAAATCTGAGCCACTGCCCCCAAAGCTAGTTCGCTTGCACTCTGCGACTTCAGTACAACCAGTTGATTATGCACTTAAAGAGACGAGCCCATTCCTTGGTGGGGGAAGAGTTGTTGGTGGCCGTGTTGTTCACAAAGACAAGACAGCGAGCACATATGATCTTGTTGAACGGATGTACTTTCTCTATGTAAGAGTTGTTAAGGCACATGACCTTCCCGCTATGGATGTTACTGGGAGTCTTGATCCATTTGTTGAGGTGAGAATTGGGAACTATAAAGGTATTACCAAACACTTCGAAAAGAAGCAGAATCCTGAGTGGAATCAGGTATTTGCCTTTTCAAAGGACAGGATGCAAGCTTCTGTACTAGAAGTTGTGATCAAGGACAGGGATCTGGTTAAGGATGATTTTGTTGGCATTGTAAGGTTTGATATCAATGAGGTTCCATTGAGGGTACCACCAGATAGCCCTTTGGCACCAGAATGGTACCGGCTTGAAGATAAGAAAGGAGAGAAGGTTAAGGGTGAACTGATGCTTGCAGTCTGGATTGGCACCCAAGCAGATGATGCTTTTTCTGATGCATGGCATTCAGATGCAGCTATACCTGTTGACAGCACACCTGCTTCCTCCGCAGTTTTACGTTCAAAGGTGTATCATGCACCAAGGTTATGGTATGTACGTGTAAATGTTGTAGAGGCACAAGACTTGGTTCCCACAGAGAAAAATCGTTTCCCAGATGTGTATGTGAAGGCACATATAGGAAACCAAGTGCTGAAAACAAAGGCAGTTCCAGCACGAAATCTGAACCCACTTTGGAATGAGGATCTTCTGTTTGTTGCTGCTGAACCTTTTGAAGATCATCTAGTCCTTACGGTTGAGGATCGGGTTGGTCCTGGAAAAGATGAGATCATTGGTAGGGTAATCATTCCCCTAAATGCTGTAGAGAGGCGTGCTGATGATCGAATGATACATTCGAGATGGTTCAACCTGGAAAAACCAGTTGCAGTGGATGTTGATcagttgaagaaagaaaagttctCTAGCAGAATCCACCTCCGTTTATGTCTAGATGGAGGATATCATGTTCTTGATGAATCAACTCATTACAGCAGTGATCTTCGACCCACAGCAAAGCAGCTCTGGAAGCCACCAATTGGGATTCTAGAACTTGGAGTGTTGAATGCTGTAGGACTCCACCCAATGAAAACACGTGATGGGAGGGGCACATCAGACACATACTGTGTTGCAAAATATGGTCATAAATGGGTCAGAACACGAACTATGGTTGATAATTTGAATCCGAAGTACAACGAGCAGTACACTTGGGAGGTTTTTGATCCAGCGACAGTTCTCACAGTTGGTGTGTTTGACAATAGCCAGATCGGTGAAAAGGATTCCAAGGACCTGAAAATTGGCAAGGTCAGAATTCGTATCTCAACTCTGGAAACAGGCCGCATTTACACTCACTCTTATCCATTGCTGGTTCTTCACCCAACTGGAGTTAAGAAGATGGGTGAACTGCACTTGGCAATACGGTTTTCATGCACTTCTTTTGCCAACATGCTATACCTATACTCACGACCATTGCTGCCGAAAATGCACTACATAAGGCCCTTCTCCGTTATGCAGCTTGACATGCTTCGCCACCAAGCTGTCAACATAGTCGCCACACGTCTAGGTCGAGCAGAGCCTCCACTCCGTAAGGAAGTGGTAGAATACATGTCTGATGTGGATTCACACCTTTGGAGCATGCGCCGAAGTAAGGCCAACTTTTTCAGGCTCATGACAGTGTTTTCAGGTGTATTTGCTGTTGGAAAGTGGTTTGGAGATATCTGCTTCTGGAGAAATCCAATTACAACAGTGCTAGTTCATGTCCTCTTTCTAATGCTAGTTTGCTTCCCAGAATTGATTCTGCCTACAGTTTTTCTCTACATGTTTCTAATAGGGATATGGAACTTCCGGTACCGTCCAAGATACCCTCCTCATATGAATACAAGAATCTCACAAGCTGAAGCAGTGCACCCAGACGAGTTAGATGAAGAATTTGACACATTCCCCACAAGCCGAAACCCAGACCTGGTAAGAATGAGGTATGACCGTTTGAGGAGTGTGGCTGGTAGAATTCAAACTGTAGTGGGTGATTTGGCCACCCAGGGAGAGAGGATTCAAGCACTCTTAAGCTGGAGAGACCCTCGTGCTACAGCCATCTTTGTTACACTCTGTTTCGTATCTGCTATGTTTCTATATGTCACTCCATTTCAAGTGATAGCAGCACTGGCAGGCTTCTATGTGATGAGGCATCCAAGATTTCGTCACAGGGCGCCATCACCACCAATTAACTTCTTCCGTCGCCTGCCTGCAAGGACAGACAGTATGTTGTA 3023 0.4386 MNNLKLGVDVVSAHNLLPKDGQGSSSAFVELYFDGQKFRTTIKEKDLNPVWNESFYFNISDPSNLHYLSLDVYVHNHAKPTNSSSFLGKVSLTGSSFVPYSDAVVLHYPLEKRGIFSRVRGEIGLRVYVTDDSTIKSSTPVAGAESTPTNNPGSIQADTHAPANSVTNTNAKVESRHTFHHLPNPNHHEHQHQHQHHSSSVADTRYVTKYESDEMKSEPLPPKLVRLHSATSVQPVDYALKETSPFLGGGRVVGGRVVHKDKTASTYDLVERMYFLYVRVVKAHDLPAMDVTGSLDPFVEVRIGNYKGITKHFEKKQNPEWNQVFAFSKDRMQASVLEVVIKDRDLVKDDFVGIVRFDINEVPLRVPPDSPLAPEWYRLEDKKGEKVKGELMLAVWIGTQADDAFSDAWHSDAAIPVDSTPASSAVLRSKVYHAPRLWYVRVNVVEAQDLVPTEKNRFPDVYVKAHIGNQVLKTKAVPARNLNPLWNEDLLFVAAEPFEDHLVLTVEDRVGPGKDEIIGRVIIPLNAVERRADDRMIHSRWFNLEKPVAVDVDQLKKEKFSSRIHLRLCLDGGYHVLDESTHYSSDLRPTAKQLWKPPIGILELGVLNAVGLHPMKTRDGRGTSDTYCVAKYGHKWVRTRTMVDNLNPKYNEQYTWEVFDPATVLTVGVFDNSQIGEKDSKDLKIGKVRIRISTLETGRIYTHSYPLLVLHPTGVKKMGELHLAIRFSCTSFANMLYLYSRPLLPKMHYIRPFSVMQLDMLRHQAVNIVATRLGRAEPPLRKEVVEYMSDVDSHLWSMRRSKANFFRLMTVFSGVFAVGKWFGDICFWRNPITTVLVHVLFLMLVCFPELILPTVFLYMFLIGIWNFRYRPRYPPHMNTRISQAEAVHPDELDEEFDTFPTSRNPDLVRMRYDRLRSVAGRIQTVVGDLATQGERIQALLSWRDPRATAIFVTLCFVSAMFLYVTPFQVIAALAGFYVMRHPRFRHRAPSPPINFFRRLPARTDSML 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00173 1007 MobiDBLite consensus disorder prediction 179 199 - -
Bva08g00173 1007 CDD C2A_MCTP_PRT_plant 5 131 - -
Bva08g00173 1007 ProSiteProfiles C2 domain profile. 583 705 IPR000008 -
Bva08g00173 1007 Pfam C2 domain 600 707 IPR000008 -
Bva08g00173 1007 Pfam C2 domain 5 96 IPR000008 -
Bva08g00173 1007 Pfam C2 domain 438 544 IPR000008 -
Bva08g00173 1007 Pfam C2 domain 276 370 IPR000008 -
Bva08g00173 1007 ProSiteProfiles C2 domain profile. 418 542 IPR000008 -
Bva08g00173 1007 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 438 591 IPR035892 -
Bva08g00173 1007 MobiDBLite consensus disorder prediction 136 162 - -
Bva08g00173 1007 MobiDBLite consensus disorder prediction 179 202 - -
Bva08g00173 1007 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 274 415 IPR035892 -
Bva08g00173 1007 Gene3D C2 domain 1 130 IPR035892 -
Bva08g00173 1007 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Bva08g00173 1007 ProSiteProfiles C2 domain profile. 257 377 IPR000008 -
Bva08g00173 1007 SMART C2_3c 439 537 IPR000008 -
Bva08g00173 1007 SMART C2_3c 601 704 IPR000008 -
Bva08g00173 1007 SMART C2_3c 5 106 IPR000008 -
Bva08g00173 1007 SMART C2_3c 275 371 IPR000008 -
Bva08g00173 1007 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 4 1007 - -
Bva08g00173 1007 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 4 1007 - -
Bva08g00173 1007 CDD C2D_MCTP_PRT_plant 601 724 - -
Bva08g00173 1007 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 600 735 IPR035892 -
Bva08g00173 1007 Gene3D C2 domain 584 729 IPR035892 -
Bva08g00173 1007 Gene3D C2 domain 421 570 IPR035892 -
Bva08g00173 1007 Gene3D C2 domain 256 397 IPR035892 -
Bva08g00173 1007 CDD C2B_MCTP_PRT_plant 275 399 - -
Bva08g00173 1007 CDD C2C_MCTP_PRT_plant 439 589 - -
Bva08g00173 1007 Pfam Plant phosphoribosyltransferase C-terminal 852 1007 IPR013583 -
Bva08g00173 1007 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 137 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00173 Bva-Chr8 853907 856930 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00173 165 1007 Lipid Metabolism Gene Families AT4G11610 79.580 0.0 1435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00173 - - gmx:100777951 1791.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00173 08 853907 856930 Bva08g00173 08 853907 856930 ECH