Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00164 ATGGTCGAATCAATTGCTGCAACTTCACTTCTGGGCCATCGTCCTGTCTGTGGCAGGGATTTAATCAGGAACAAACGTAAATCTTTGAATAAATGTGCATATTTCCCCGCAACTGAATTCCTTGGTGGAAGGGTTATTGCTTTTCTACCTCTgccaaaatcaaaagaagatgGCTTGTCGTCGTCATCAATTAAGGTTCTGGCTATGGAGCTCACTAAAGAAGCATATTCATACAGGGAAGACAGAATACCCAAGAAATATACTGACAAGATCGATACTGGCTTTGATCGAAGACCTGGTTTGTGGCCACCAGTGAATAAAGCTGATAACCCTTCCCTTCATAATCCCTTACTTCGACAAGAAAGGATGGGATGTGGCTGGTTGGGTGTCATATTTGAGTGGGAAGGGGTTCTCATTGAAGATAACCCCGATATTGAAAAGCAAGCTTGGCTGGCCCTTTCtcaagaagaaggaaaatccCCTCCTCCTGCATTCATCCTTAAGAGAATAGAAGGGATGAAGAATGAACAGGCAATTTCTGAGGTTCTCTGCTGGTCCAGGGACCCAGCAGAATTAAGAAGAATGGCtaatagaaaggaagaaattcaCCAAGCTTTGCAAGGTGGGATATATAGGCTACGGGATGGATCGAAAGAGTTTTTGAGTTTGTTGATGCAATATAACATACCAATGGCTTTGATTTCTACACGACCTAGAAAGGCTCTCGAATCTGCAATAGGGACAACTGGCATTGAAGATAATTTCAGTGTCATTGTAGCAGCGGAGGATGTGCACAGGGGAAAACCTGATCCAGAAATGTTTGTGTATGCCGCACAGCTTTTAAACTTCATACCTGAGAGGTGCATTGTATTTGGGAACTCAAATCAATCAGTGGAGGCTGCACATGATGCACGGATGAAGTGTGTGGCTGTTGCTAGCAAGCATCCGGTCTATGAGCTTGGGGCTGCGGACTTGGTTGTTAGCCACCTAAATGAGCTTTCAGTGGTTGATTTGAAGAATCTAGCTGATATTGAATCAACTGAATTTGGATCTGGGGACCCAGAGTTGGAGCTAGAGGAGGAAGAATATTCTGAGCCATCTTCAACACTTGGAGCTGTCGATGACAGTTTCTGGTG 1136 0.4234 MVESIAATSLLGHRPVCGRDLIRNKRKSLNKCAYFPATEFLGGRVIAFLPLPKSKEDGLSSSSIKVLAMELTKEAYSYREDRIPKKYTDKIDTGFDRRPGLWPPVNKADNPSLHNPLLRQERMGCGWLGVIFEWEGVLIEDNPDIEKQAWLALSQEEGKSPPPAFILKRIEGMKNEQAISEVLCWSRDPAELRRMANRKEEIHQALQGGIYRLRDGSKEFLSLLMQYNIPMALISTRPRKALESAIGTTGIEDNFSVIVAAEDVHRGKPDPEMFVYAAQLLNFIPERCIVFGNSNQSVEAAHDARMKCVAVASKHPVYELGAADLVVSHLNELSVVDLKNLADIESTEFGSGDPELELEEEEYSEPSSTLGAVDDSFW 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00164 378 Pfam Haloacid dehalogenase-like hydrolase 130 311 IPR041492 -
Bva08g00164 378 MobiDBLite consensus disorder prediction 350 364 - -
Bva08g00164 378 PANTHER BETA-PHOSPHOGLUCOMUTASE-LIKE ISOFORM X1 2 376 - -
Bva08g00164 378 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 248 311 IPR006439 -
Bva08g00164 378 CDD HAD_BPGM-like 129 313 - -
Bva08g00164 378 Gene3D Putative phosphatase; domain 2 140 213 IPR023198 -
Bva08g00164 378 SUPERFAMILY HAD-like 130 333 IPR036412 -
Bva08g00164 378 Gene3D - 130 328 IPR023214 -
Bva08g00164 378 PANTHER 5-AMINO-6-(5-PHOSPHO-D-RIBITYLAMINO)URACIL PHOSPHATASE, CHLOROPLASTIC 2 376 - -
Bva08g00164 378 MobiDBLite consensus disorder prediction 349 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00164 Bva-Chr8 799045 801094 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00164 K22912 - mnt:21407026 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00164 08 799045 801094 Bva08g00164 08 799045 801094 ECH