Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00163 ATGGGGAATCGAAGGTTCAAGCAGGTCCCCACCAGCGACGATGAAGAAGAGGGACCACCACGTccgcagcagcagcaacaatcTTCGGCGTCGGAAGACAAGCGGTCGAAGCTGCGCACGAGGAAGAGGATAAAGCTTCCAGCGGAAGAAGATGAGGATGTGGAggagaacaaaaagaagaagaagcagaaagaTGAGCAAAAGGAAGGGCAGCAGGCTGACGACGAAGTAGAGGAACCGCTCCAAGAGGACGCTAAGCCGATTGGTGATCCTATTAGGGTTTCCGGAAAAGGAAGAGGTAGGAGGAAGCATTACGAGTCGTTCGAATTCGATGGCAACCAATATGTACTTGAGGATCCTGTACTTCTAGTTCCCGAGGATAAAGACCAAAAGCCTTATGTGGCGATTATTAAgGACATTACACAATCCCAAAATGGCAGCATGATGGTGACAGGGCAGTGGTTTTATCGTCCGaagaagcagaaagaaaaGTGTTTGGTGCATTTTGTTCCTAGAAACAAACAGCTTCCAAATCGTAAACAGCATCCTGGTTTTATTGTTCAAAGGGTTTATGACACTGTGGAAAGAAAACTCTGGAAGCTAACTGATAAGGACTATGAGGATATCAAACAGCAAGAAATTGATGAGCTTGTCGGGAAAACTAAACAACGTTTGGGTGAGCTACCTGACATTGAGACTGAAGAAGCCCCTGCTGATCAGGAAGATCagatgaagaaacaaaaaagtttcAGGAGAAAGAACATATCACCTATTGATGTTTCAAGGGAGGAGGAAGCCGCTCCCAAGACTGACCAGAATCTGAAACCTGAAACACCAGGAAGTTGTGTAAATAATGCGTCAGAGCATTACcacatattagtaaatttcAATGTACTAACTGGAGATAACCATCGTGACAAATGTCTGGAGAAGTTGCTTCAAAGCATTCAGTATGTGTGTAATTCTGATGATGGTGCACCGAAGGAGGAGGGAGGAAGGGATAATTCTGATACCATCAATAATGGAAGCGATAATATAAAGTTAGAAACAGAAAATGGTTCTAAGTCTTTTACATGGCCAGATGCGGCTGTTCCAGCCATAGCTGCCCTGGAAAAAGCTTCACATGATGCTTTTCCCTCAgattatctaaaatataacCAGAAGTTACGGCAATTGGTATTTAATCTCAAGAACAATGCAGTGCTAGCACGTCGACTATTAAATGGAGAGTTGGaaccttcaaaaatattaaacatgtCACCCACTGAATTAAAgGAGGGTTTGACTGCTGAGGAAATAGCAAAGAAGGAACCTGACGAGAAGCAGCACATGCAGATGACAGATGCCCGCTGCTCAAGATGCGATGGTAAGGTTGGTGTGAAGGATATTATCCATGCAGGACATGGTGACAGATACCAGTTGGAATGTATGGCATGCGGTAATTCGTGGTACGCATCTGGGGATGCTGTATCTGTGTTGACCGTAGATGCACCAGATTCATCCAGAAACGTAGGAACGGCGCCGTGGGCCACTGCCAAGTTTGAAGATGTTGAAAAGAAACTGATGAGTCCCCGTGAATCCGACAAGTCAACCCAAGACATCCTTAAAAAAACAAGTGAAGCATATATGCCTGTCTTGGACCCCCAGAAACCAGTTGGCAAGTCCAGGAAAGATGAGAACACCGAACATACAGGACATGCTGAATG 1706 0.4185 MGNRRFKQVPTSDDEEEGPPRPQQQQQSSASEDKRSKLRTRKRIKLPAEEDEDVEENKKKKKQKDEQKEGQQADDEVEEPLQEDAKPIGDPIRVSGKGRGRRKHYESFEFDGNQYVLEDPVLLVPEDKDQKPYVAIIKDITQSQNGSMMVTGQWFYRPKKQKEKCLVHFVPRNKQLPNRKQHPGFIVQRVYDTVERKLWKLTDKDYEDIKQQEIDELVGKTKQRLGELPDIETEEAPADQEDQMKKQKSFRRKNISPIDVSREEEAAPKTDQNLKPETPGSCVNNASEHYHILVNFNVLTGDNHRDKCLEKLLQSIQYVCNSDDGAPKEEGGRDNSDTINNGSDNIKLETENGSKSFTWPDAAVPAIAALEKASHDAFPSDYLKYNQKLRQLVFNLKNNAVLARRLLNGELEPSKILNMSPTELKEGLTAEEIAKKEPDEKQHMQMTDARCSRCDGKVGVKDIIHAGHGDRYQLECMACGNSWYASGDAVSVLTVDAPDSSRNVGTAPWATAKFEDVEKKLMSPRESDKSTQDILKKTSEAYMPVLDPQKPVGKSRKDENTEHTGHAE 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00163 568 SUPERFAMILY Elongation factor TFIIS domain 2 298 425 IPR036575 GO:0006351
Bva08g00163 568 MobiDBLite consensus disorder prediction 32 75 - -
Bva08g00163 568 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 164 - -
Bva08g00163 568 MobiDBLite consensus disorder prediction 520 535 - -
Bva08g00163 568 MobiDBLite consensus disorder prediction 1 101 - -
Bva08g00163 568 MobiDBLite consensus disorder prediction 238 271 - -
Bva08g00163 568 ProSiteProfiles TFIIS central domain profile. 304 452 IPR003618 GO:0006351
Bva08g00163 568 Gene3D - 284 426 IPR036575 GO:0006351
Bva08g00163 568 SMART mid_6 302 434 IPR003618 GO:0006351
Bva08g00163 568 MobiDBLite consensus disorder prediction 225 282 - -
Bva08g00163 568 Gene3D - 6 179 IPR043151 -
Bva08g00163 568 Pfam Transcription factor S-II (TFIIS), central domain 300 443 IPR003618 GO:0006351
Bva08g00163 568 ProSiteProfiles BAH domain profile. 113 261 IPR001025 GO:0003682
Bva08g00163 568 MobiDBLite consensus disorder prediction 520 568 - -
Bva08g00163 568 MobiDBLite consensus disorder prediction 551 568 - -
Bva08g00163 568 MobiDBLite consensus disorder prediction 324 345 - -
Bva08g00163 568 SMART BAH_4 113 202 IPR001025 GO:0003682
Bva08g00163 568 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 163 563 - -
Bva08g00163 568 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 163 563 - -
Bva08g00163 568 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00163 Bva-Chr8 792370 796848 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00163 - - gmx:100787670 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00163 08 792370 796848 Bva08g00163 08 792370 796848 BWGD
Bva08g00163 08 792370 796848 Bva08g00163 08 792370 796848 ECH