Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00154 ATGGCTTTGACATTACTCtctctttctaattttctttatcctAAATCCAGCTTCATCACTGTGAGTGtaaattctcattctcattctcatcaCGTTTCTTTCAGACCCTTGCTCCATTCTCTCTCTACACCATTCCATTTTCGAACTCTTGGAGCTCCTGCTGCTATTGGCCCGGATGGTAAGTTCTATCCCAACTCAGCAGACGATGACCCACCAGAGGCCCTTGAGGATTCTGCTCATGGTGTTTCCAAATTCCAGCAAATACATCGTCAAGCCGCCCGTGCTCGACAGCTCCAAGAAGAAGATTTCAAAAAGAACCAGTCCACATACCTTGCTGCTCTTGCAGATGTCGAAGATGCTCCCGAAAACCTTGATTCTCTGGATTCTGAAAATTCCGGGGACGATTTGTTCggtgaaattgataaagccATAGCCTTGAAGCGTAAGGAGTTTGTGAAGCAGGGACTTCTGAAGCCCAATCCCAGGAaagagcagcagcagcagccgGTTTTTGAGGGAATTGATGAGTTGCAACCCGAGGAGGTCATTGATTTGGAGGAAATAAACGAACTTCAGGGACTCAGAATGACTTCCCAAGATTCTGATGGAGAAGAAGAGGGCTCTGCAGCCAGTGAATTGGAGAATAGCAATAAAGTTGGCGCTTCTTCTTTAAATTCTTCATTTGATTTGGATTTCGATAGCTATGGAAAAATTAAGGCTAGAATTACGGAGCCCAAATTCAAAATGACTTTGGCTGAGCTTTTGGATGAGAGTAAGGTTGTACCTGTGTCAGTGTACGGTAATTTGGAGGTTGAGATTACCGGAATTCAGCATGATTCGAGGCTAGTTAACTCTGGTGATTTGTTTGTATGCTGCCTCGGCCCAAAAACTGATGGGCATTTGTACTTGACTGAGGCTGACAAGAGAGGGGCAGTTGCAGTAGTGGCGAGTAAAGAGATAGATATTGAACAGACATTGGGTTGTAAGGCCTTGGTTATTGTGGAAGACACTAATGCTGTTCTTGCTGCCCTTGCGTCATCCTTTTACAAGTATCCTTCAAAAAATATGGCTGTTATTGGGATAACTGGGACAAATGGGAAAACGTCCACTGCCTATTTGATAAAAAGCATGTATGAAGCAATGGGACTACGAACTGGAATGTTGAGCTCTGTTGCTTATTATGTTCATGGGGATAATAGATTGGAGTCACCAAACACAAACCCGGATGCTGTTTTAGTTCAAAATTTGATGGCGAAGATGCTTCACAACGGAACTGAAGCAGTAGTCATGGAAACTTCTTCTCATGGACTCGCTCTAGGAAGGTGCGATGAGGTTGATTGTGATATTGCAGTTTTTACGAATTTGACGAGGGACCATAAGGATTTCCATGGGTCTGAGGAGGCATACAGAGATGCAGAGGCTAAACTTTTCTCAAGAATGGTGGACCCTGAAAGGCACAGGAAAGTTGTTAATATTGATGATTCAAATGCACCTTTCTTTATGTCACAGGGGAACCCGAAAGTTCCTACTGTAACCTTTGCAATGGAGAATAAGAATGCAGATGTTCATCCCATCAAGTTTGAGCTCTCCCTGTTTGAGACTCAGGTGTTGGTTAATACACCCGATGGCATACTAGAAATTTCATCCGGTTTACTTGGAAGACATAATATTTACAACATTCTTGCTGCCGTAGCAGTTGGCATTGCTGTTGGGGCGCCTTTAGAGGACATAGTCAGAGGGATTGAAGAGGTTGACGCAGTTCCTGGAAGGTGTGAATTAATTGACGAGGAACAAGCGTATGGGGTGATTGTGGACTATGCTCGTACTCCTGATGGCTTGTCTAGATTACTTGATTCTGTAAGAGAGCTTGGACCTCGGAGGATTATAACTGttTTCGGCTGTTGTGGTGAGGACGAAAGAGGGAAAAGACCCCTGATGACCAAGATAGCGACAGATAAAAGTGACGTGACCATTCTGACATCTGACAATTCGAAGAATGAAGATCCATTGGATATTTTGGATGATATGTTAGCTGGAGTCGGATGGACAATGCAAGACTACCTGAAATATGGAGAGAACGATTACTATCCACCTCTTCAGAATGGCCATAGGCTTTTCCTACATGACATTCGACGGGTAGCTGTACGAGCTGCAGTTGCAATGGGAGAGGAAGGTGATGTGGTTGTTGTTGCTGGCAAAGGCCACGAAACATATCAAATAGAAGGTGAAAAGCAGGAGTTCTTTGATGATCGAGAAGAGTGCCGAGAGGCATTGCAGTATGTTGATGAGCTTCACCAAGCAGGAATAGATACAAGTGAATTTCCATGGCGGTTACCGGAGAGCCATTG 2348 0.4267 MALTLLSLSNFLYPKSSFITVSVNSHSHSHHVSFRPLLHSLSTPFHFRTLGAPAAIGPDGKFYPNSADDDPPEALEDSAHGVSKFQQIHRQAARARQLQEEDFKKNQSTYLAALADVEDAPENLDSLDSENSGDDLFGEIDKAIALKRKEFVKQGLLKPNPRKEQQQQPVFEGIDELQPEEVIDLEEINELQGLRMTSQDSDGEEEGSAASELENSNKVGASSLNSSFDLDFDSYGKIKARITEPKFKMTLAELLDESKVVPVSVYGNLEVEITGIQHDSRLVNSGDLFVCCLGPKTDGHLYLTEADKRGAVAVVASKEIDIEQTLGCKALVIVEDTNAVLAALASSFYKYPSKNMAVIGITGTNGKTSTAYLIKSMYEAMGLRTGMLSSVAYYVHGDNRLESPNTNPDAVLVQNLMAKMLHNGTEAVVMETSSHGLALGRCDEVDCDIAVFTNLTRDHKDFHGSEEAYRDAEAKLFSRMVDPERHRKVVNIDDSNAPFFMSQGNPKVPTVTFAMENKNADVHPIKFELSLFETQVLVNTPDGILEISSGLLGRHNIYNILAAVAVGIAVGAPLEDIVRGIEEVDAVPGRCELIDEEQAYGVIVDYARTPDGLSRLLDSVRELGPRRIITVFGCCGEDERGKRPLMTKIATDKSDVTILTSDNSKNEDPLDILDDMLAGVGWTMQDYLKYGENDYYPPLQNGHRLFLHDIRRVAVRAAVAMGEEGDVVVVAGKGHETYQIEGEKQEFFDDREECREALQYVDELHQAGIDTSEFPWRLPESH 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00154 782 Pfam Mur ligase middle domain 361 566 IPR013221 GO:0005524|GO:0009058|GO:0016881
Bva08g00154 782 SUPERFAMILY MurE/MurF N-terminal domain 266 350 IPR035911 -
Bva08g00154 782 MobiDBLite consensus disorder prediction 194 218 - -
Bva08g00154 782 SUPERFAMILY MurD-like peptide ligases, catalytic domain 352 584 IPR036565 GO:0005524|GO:0009058
Bva08g00154 782 Hamap UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 249 758 IPR005761 GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301
Bva08g00154 782 Pfam Mur ligase family, catalytic domain 272 349 IPR000713 GO:0009058|GO:0016881
Bva08g00154 782 TIGRFAM murE: UDP-N-acetylmuramyl-tripeptide synthetase 271 759 IPR005761 GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301
Bva08g00154 782 Gene3D - 352 590 IPR036565 GO:0005524|GO:0009058
Bva08g00154 782 PANTHER MUR LIGASE FAMILY MEMBER 227 772 - -
Bva08g00154 782 Pfam Mur ligase family, glutamate ligase domain 587 670 IPR004101 GO:0009058|GO:0016881
Bva08g00154 782 Gene3D - 250 350 - -
Bva08g00154 782 Gene3D - 592 769 IPR036615 GO:0009058|GO:0016881
Bva08g00154 782 PANTHER UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE MURE HOMOLOG, CHLOROPLASTIC 227 772 - -
Bva08g00154 782 SUPERFAMILY MurD-like peptide ligases, peptide-binding domain 587 759 IPR036615 GO:0009058|GO:0016881
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00154 - - qsu:112035265 1210.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00154 08 751238 753175 Bva08g00154 08 751238 753175 ECH