Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00153 ATGGTGCGAGATTTGGCAGAACCATTgtgtcaaaagagaaaaaatgcaCGTCAAACACGGCTTATTCTTGCAGATCCCCGAGATTGTTGCCACGCGCCAAAGAATAAGCTTGCTGGAGATGTCATAATGGTGGATCGAGGAAACTGCACATTCACAAACAAGGCAAACATTTCACAAGCTGCTAATGCTTCAGCTATCCTCATTATCAATACtgaaaaagAACTTTATAAGATGGTTTGTAAACCTGATGAAACTGATGTAAACATACACATACCTGCTGTCATACTCCCGCGAGATGCAGTTTCTGTGCAGCTATACTCTCCTCGTCGACCCATAGTTAACATAGCAGAAGTATTTCTATGGTTGATGGCAGTTGGTACCATATTGTGTGCTTCTTATTGGTCTGCATGGAGTGCAAGAAAAGCAGCTGTCGAACAAGATAAACTATTAAAAgattCTGCTGATGAAATCCCAGGCACTAAAGATTCTGGCGCTAGTGGTGTCATATACGTAAATACGAAAGCTGCGGTCCTTTTTGTTGTACTTGCTTCATGTTTGTTGTTTATGCTTTACCATTTTATGTCCTCCTGGCTCGTTGAGGTTTTGGTTGTTCTCTTCTGTATTGGTGGGGCAGAGGGGTTACGAACAGGCTTAGTTGCTTTTTTGTCAAGGTGGTTCAAACGTGCTCGGGAGCCATACATTGAAGTACCTTTATTTGGAGCTATCTCGTACCTGACTTTGGCGGTTTCTCCATTCTGCATAACATTTTCTGTTCTCTGGGCAGTTTATCGCAATATTTCTGCTGCCTGGATGGGTCAAGATGGAATTGCAATGATAATCACAGTTCTCCAGATTGTGCATATACCTAATCTCAAGGTTGGTGCAGTTCTTCTCAGTTGTGCCTTTATGTACGACCTCTTTTGGGTGTTTGTCTCAAAAAAGTTGTTCAGTGAGAGTGTGATGATTGCGGTAGCCCGAGGAGGATTTGGAGACATCCTCTTACCGGGACTGCTGGTAGCATTCGCACTCAGGTACGATTGGCTGGCCTACAAGACTCTTCGAGCTGGATACTTCTTGTGGGCAATGTTTGCGTATGGCTTTGGTCTTCTGATTACGTATGTGGCACTAAACTTGATGGATGGACATGGTCAACCAGCACTGCTTTACATTGTTCCATTTACCCTTGGGACCTTTCTGACATTGGGGAGGAAGCGAGGAGATCTGAGGACCTTGTGGAGCAGAGGAGAACCACAGAGTATCTGTCCTCATATCAGACTCCAACATAGTGAAGACTTGAATTTTGAATG 1307 0.43 MVRDLAEPLCQKRKNARQTRLILADPRDCCHAPKNKLAGDVIMVDRGNCTFTNKANISQAANASAILIINTEKELYKMVCKPDETDVNIHIPAVILPRDAVSVQLYSPRRPIVNIAEVFLWLMAVGTILCASYWSAWSARKAAVEQDKLLKDSADEIPGTKDSGASGVIYVNTKAAVLFVVLASCLLFMLYHFMSSWLVEVLVVLFCIGGAEGLRTGLVAFLSRWFKRAREPYIEVPLFGAISYLTLAVSPFCITFSVLWAVYRNISAAWMGQDGIAMIITVLQIVHIPNLKVGAVLLSCAFMYDLFWVFVSKKLFSESVMIAVARGGFGDILLPGLLVAFALRYDWLAYKTLRAGYFLWAMFAYGFGLLITYVALNLMDGHGQPALLYIVPFTLGTFLTLGRKRGDLRTLWSRGEPQSICPHIRLQHSEDLNFE 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00153 435 PANTHER SIGNAL PEPTIDE PEPTIDASE 9 327 IPR007369 GO:0004190|GO:0016021
Bva08g00153 435 Pfam Signal peptide peptidase 328 416 IPR007369 GO:0004190|GO:0016021
Bva08g00153 435 Pfam Signal peptide peptidase 171 326 IPR007369 GO:0004190|GO:0016021
Bva08g00153 435 SUPERFAMILY PA domain 36 76 IPR046450 -
Bva08g00153 435 PANTHER SIGNAL PEPTIDE PEPTIDASE 328 432 IPR007369 GO:0004190|GO:0016021
Bva08g00153 435 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE 2 328 432 - -
Bva08g00153 435 Gene3D - 8 103 - -
Bva08g00153 435 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE 2 9 327 - -
Bva08g00153 435 SMART psh_8 167 405 IPR006639 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00153 Bva-Chr8 743588 748087 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00153 K09597 - gmx:100815915 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00153 08 743588 748087 Bva08g00153 08 743588 748087 ECH