Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00151 ATGTGGTTTCTGGGTTGGAAAGGGGCATCTGGATTCTCGGCCTCGTCCACAGCAGAGCAAGTGACGCGAGGAATCGTCGGGGAAGGTCTCACCGCCATCGTTAcagGAGCATCTAGTGGTCTTGGTCTGGAGACCACCCGGGTTCTTGCTCTGCGGGGTGTCCATGTTGTTATGGCAGTAAGGAATGTGGAAGCTGGTAGAAACGTCAAACAAACGATAATTGATGATATTCCCACTGCTAAAATTGATGTTATGGAGTTAGATCTTAGCTCCATGGCTTCCGTAAGGAAATTTGCTGCAGATTATACTTCATCTGGTCGTCCACTCAATATTCTAATTAATAATGCAGGAGTAATGGCAACTCCATTCATGACTTCCCAAGACAACATTGAATTTCAGTTTGCAACCAATCATTTAGGTCATTTTCTGTTGACAAATCTTCTGTTGGAAACTATGAAACAAACCGTACGTGAATGCAACAAGGAGGGAAGAATAGTTATTGTGTCATCAGAGGCACACAAATTTGCATATGATGAAGGGATTCGTTTTGATAAGATCAATGATGAATCAGGATACCATAGTTATTTTGCTTATGGACAATCGAAGCTTGCTAATATTTTACATGCAAATGAACTTGCAAGACGCTTGAAGGAAGAAGGAGTAAAAATAACTGCTAACTCCCTTCATCCTGGAtcaattattacaaatattctGCGTTACCATAGTTATATTAATGCCGTTGCTAATATGGTTGGGAAGTACTTCCTTAAGAGTGTTGAGCAGGGAGCCGCAACGCAATGTTATTTGGCATTGCATCCGCAAGTCGAGGGAATATCTGGTGAATATTTTATGGATAGCAATAAAGCAAACCCAAGCTCTCTGGCCACAGATTCGGGGTTGGCAAAACAGCTTTGGGAATTCAGCTCGAGCCTGACCAATCTAAAGTA 947 0.4161 MWFLGWKGASGFSASSTAEQVTRGIVGEGLTAIVTGASSGLGLETTRVLALRGVHVVMAVRNVEAGRNVKQTIIDDIPTAKIDVMELDLSSMASVRKFAADYTSSGRPLNILINNAGVMATPFMTSQDNIEFQFATNHLGHFLLTNLLLETMKQTVRECNKEGRIVIVSSEAHKFAYDEGIRFDKINDESGYHSYFAYGQSKLANILHANELARRLKEEGVKITANSLHPGSIITNILRYHSYINAVANMVGKYFLKSVEQGAATQCYLALHPQVEGISGEYFMDSNKANPSSLATDSGLAKQLWEFSSSLTNLK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00151 315 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Bva08g00151 315 PRINTS Glucose/ribitol dehydrogenase family signature 221 238 IPR002347 -
Bva08g00151 315 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Bva08g00151 315 PRINTS Glucose/ribitol dehydrogenase family signature 198 217 IPR002347 -
Bva08g00151 315 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Bva08g00151 315 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 287 IPR036291 -
Bva08g00151 315 Gene3D - 27 315 - -
Bva08g00151 315 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 2 312 - -
Bva08g00151 315 Pfam short chain dehydrogenase 31 177 IPR002347 -
Bva08g00151 315 PANTHER RETINOL DEHYDROGENASE 2 312 - -
Bva08g00151 315 CDD retinol-DH_like_SDR_c_like 29 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00151 Bva-Chr8 736377 739713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00151 33 291 Acyl Lipid Metabolism Gene Families AT3G55310 28.309 2.98e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00151 - K19329 gmx:100793781 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00151 08 736377 739713 Bva08g00151 08 736377 739713 ECH