Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00148 atgcCACCTTTTGCACCATCTCATACTGATGGGTTTCAGCTACCAAAACCAGATTCTAATATAGTCACCATTGATGTGGGTGGTCAGCTCTTCCAAACCACCAAGCAGACACTCAATTCAACGGGCCCCAAGTCCTTCTTCTCCAGGATCGCCGACTCTGTGTCTGGATCTCAACAAATCTCTATCCCCTTCATCGATAGAGACCCTGAATTGTTCTCTATCTTCCTTTCGCTTCTCAGGAATGGTACTCTTCCATCCAAAGCCAAAGCATTTGATCTCCAAGACCTTATTTCTGAGTCCCAATTCTACGGCATCGAAAACCTTTTGTTTAATTCCCTATCTAGCCCAACTCAATTTGAACCCTTTAATCTCGAGAAGTCCTTCATTTTGCCCCTTAATGGACGAGATTCACCCTCTGCAATTGCCACCACTCGTTATGGTTCGCTCCACGTTGCCCATGGCAGCAAGATAACGTCTTTCGATTGGTCCCTCCGACGCAAGGCCACCATTTTGACCCACTTCACGGCCGTCGATTCTCTATATGCCATCTCACCGTCCGTGGCGGCGGCGGGTGCAAATGACTTTTCCGGTTTGCAAATTATTGATTTGGAAAACGGGATTGTCAGGGATACCTTATATTGGGAGAATGTGACTAGGTCCGGTTCCACAGTCCAAGCGATCGGATCTTCGGAGGATTACCTATTTGCTAGTTATGAATCGGGCCGGCGCAATTCCAACTCAATTATGGTGTATGATTTACATAACTTAAGTCCTATCACAGAGGTTGGTCACAGTGAGATTTATGGCGCTGACATTGATTCCGCAATCCCAGCAACCAAATTGAAATGGGTATCAAGTTATAATTTGCTAATGGCAGCTGGGTCTCATAGTGGTCCTTCTGGAGTATCAGGTAACATAAGATTGTGGGATGTACGGTCTGGCAATGTTGTTTGGGAAATGTCAGAGAAAATAGACTGCTTTGCCGATGTAACAGTTTCGGATAACTTGTCAGCCATCTTCAAGGTTGGCGTGAATTCTGGCGAGGCATTCTATGTGGATTTGCGTAATTTAAGTTCCGAAAGTTGCTGGGTTTGTCTTGGCgataaaagaaaagtgctCAACGGGAAGAAGGAAGGTAACGGTTGCAAGATTGAAAGTCATGCTAGTCAAGTGTTTTGCAGCAAGGGAGGGGATGTGGAGCTGTGGTCAGAGGTTATGATGAAGAACGCGGAAGGGAGGTTAGAGGAGAGGATCTTCAAGAAGAATTTGATGGGGAGGGCAAAGGACATGGGAAGTCCTAGGATTACAGCTTTGACCTTTCGAGGGGACAAAATGTTCCTGACAAGGAAGGAGCAGCAATATGTTGAAGTTTGGCAGAGTTCTGCCAGAGAACCTTG 1397 0.4553 MPPFAPSHTDGFQLPKPDSNIVTIDVGGQLFQTTKQTLNSTGPKSFFSRIADSVSGSQQISIPFIDRDPELFSIFLSLLRNGTLPSKAKAFDLQDLISESQFYGIENLLFNSLSSPTQFEPFNLEKSFILPLNGRDSPSAIATTRYGSLHVAHGSKITSFDWSLRRKATILTHFTAVDSLYAISPSVAAAGANDFSGLQIIDLENGIVRDTLYWENVTRSGSTVQAIGSSEDYLFASYESGRRNSNSIMVYDLHNLSPITEVGHSEIYGADIDSAIPATKLKWVSSYNLLMAAGSHSGPSGVSGNIRLWDVRSGNVVWEMSEKIDCFADVTVSDNLSAIFKVGVNSGEAFYVDLRNLSSESCWVCLGDKRKVLNGKKEGNGCKIESHASQVFCSKGGDVELWSEVMMKNAEGRLEERIFKKNLMGRAKDMGSPRITALTFRGDKMFLTRKEQQYVEVWQSSAREP 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00148 465 Gene3D - 139 465 IPR015943 GO:0005515
Bva08g00148 465 SUPERFAMILY WD40 repeat-like 152 357 IPR036322 GO:0005515
Bva08g00148 465 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 16 462 IPR045068 -
Bva08g00148 465 SUPERFAMILY POZ domain 19 111 IPR011333 -
Bva08g00148 465 PANTHER PROTEIN BINDING PROTEIN 16 462 - -
Bva08g00148 465 CDD BTB_POZ_KCTD-like 22 103 - -
Bva08g00148 465 Gene3D Potassium Channel Kv1.1; Chain A 15 114 IPR011333 -
Bva08g00148 465 Pfam BTB/POZ domain 22 110 IPR003131 GO:0051260
Bva08g00148 465 SMART BTB_4 20 120 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00148 Bva-Chr8 722665 724387 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00148 - - gmx:100792189 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00148 08 722665 724387 Bva08g00148 08 722665 724387 ECH