Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00138 ATGCTAGAGCCGGAGCTCTGTTCTTCTAGGGTTTTATCACCCTTCCCGGAGGAGAGTGGAGACGAGGAACTTTCGGTTCTGCCCAGACACACCAAAGTTATTGTTACTGGGAACAACAGGACTAAGTCCGTATTGGTCGGCCTGCAAGGCGTGGTGAAGAAGGCTGTTGGCCTCGGAGGTTGGCATTGGCTgGTATTGAAAAATGGGGTGGAGGTTAAGCTGCAAAGAAATGCATTGAGTGTACTAGAGGCCCCTACCGGGAACGAAGACGACGATCTTGATTTTGATAACTCGAGCAGTGGCTCTGATATTCATGAAAAAGACAATGACTTGGCAAGTAGTATTGATTTCCGCAAACTCAGCAAACCAAGAGTTCGACACAAAAGGCCTTATTTTCAATCTCTTTCGGGAAAGTCTAGCAACCGCGGGAGTTACAGAGAAGTTCAGTCCATTCTTGCACCTCAGCCCGTAAGAAAAACGAGAAAATTGATGAGGGTGAACCTAGCGAAGATAGGAACGGGCTCTTTGTGGAGATATTGCAGACATTTTAACCTCATCAGTTATAATTCGAATCTACCAAGGGAGCAAATGGTTAATGCCGTGCAGCACCATTTCGCTTTGCagCTTAAAGTGGACGAGGTACCGGTCATAAAGGAATTCCTCGGAGGAGCCAAGAGAATGAAGAGCCTGGACACACAAGTTGAGTCGGGATTCTA 716 0.4679 MLEPELCSSRVLSPFPEESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEAPTGNEDDDLDFDNSSSGSDIHEKDNDLASSIDFRKLSKPRVRHKRPYFQSLSGKSSNRGSYREVQSILAPQPRVNLAKIGTGSLWRYCRHFNLISYNSNLPREQMVNAVQHHFALQLKVDEVPVIKEFLGGAKRMKSLDTQVESGF 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00138 230 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 164 214 IPR025718 GO:0005515
Bva08g00138 230 PANTHER OS04G0166600 PROTEIN 1 223 - -
Bva08g00138 230 Gene3D - 136 230 IPR038291 -
Bva08g00138 230 MobiDBLite consensus disorder prediction 1 23 - -
Bva08g00138 230 PANTHER SAP30 1 223 IPR024145 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00138 Bva-Chr8 684319 687714 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00138 - - qsu:111986061 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00138 08 684319 687714 Bva08g00138 08 684319 687714 ECH