Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00123 ATGGCGGACGTTCATCTGGGAGAATCGGAGACCTTCGTATCCCAGGCTGAGATCAACCAATTCCTCAGCTTGATCATCAATACTTTTTACAGCAATAAGGAGATTTTTCTCCGTGAGCTCATTAGCAATGCTTCTGATGCACTCGATAAAATCGGATTTGAGAGCCTCACTAACAAGAGCAAGCTTGATGCTCAGCCTGAGCTTTTCATCAGGATCATTCCTGACAAGACCACCCAGGCACTCTCCGTCATAGACAGTGGAGTCGGCATGACCAAAGCAGATTTGGTCAATAATCTGGGGACAATCGCCAAGTCTGGGACCAAAGAGTTCTTGGAAGCTTTGCAGGCGGGCGCCGATATCAGTATGATTGGTCAATTCGGTGTTGGTTTTTACTCCGCTTACCTTGTTGCCGAGAAGTTGGAATGCTTGGAAGAGAGGAGAATAAAGGATCTTGTGAAGAAGCATTCTGAATTCATCAGTTACCCCATCTATCTTTGGACAGAGAAGACAACTGAGAAGGAGGTGAGTGACGATGAAGAAGAGGAGAGCAAGAAGGAAGAGGAAGGTGATATAGAGGAAGTTgatgagaagaaagagaagaagtcGAAAAAGAAGGTGAAGGAGGTGAGCCACGAATG 638 0.4451 MADVHLGESETFVSQAEINQFLSLIINTFYSNKEIFLRELISNASDALDKIGFESLTNKSKLDAQPELFIRIIPDKTTQALSVIDSGVGMTKADLVNNLGTIAKSGTKEFLEALQAGADISMIGQFGVGFYSAYLVAEKLECLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEVSDDEEEESKKEEEGDIEEVDEKKEKKSKKKVKEVSHE 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00123 212 Coils Coil 177 204 - -
Bva08g00123 212 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 139 212 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bva08g00123 212 MobiDBLite consensus disorder prediction 170 212 - -
Bva08g00123 212 MobiDBLite consensus disorder prediction 174 189 - -
Bva08g00123 212 Gene3D - 141 185 IPR036890 -
Bva08g00123 212 PANTHER HEAT SHOCK PROTEIN 90-1 139 212 - -
Bva08g00123 212 Pfam Hsp90 protein 142 211 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bva08g00123 212 Gene3D - 4 140 IPR036890 -
Bva08g00123 212 PRINTS 90kDa heat shock protein signature 10 30 IPR020575 -
Bva08g00123 212 PRINTS 90kDa heat shock protein signature 98 115 IPR020575 -
Bva08g00123 212 PRINTS 90kDa heat shock protein signature 199 212 IPR020575 -
Bva08g00123 212 PRINTS 90kDa heat shock protein signature 80 97 IPR020575 -
Bva08g00123 212 PRINTS 90kDa heat shock protein signature 123 145 IPR020575 -
Bva08g00123 212 PRINTS 90kDa heat shock protein signature 31 53 IPR020575 -
Bva08g00123 212 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 140 IPR003594 -
Bva08g00123 212 CDD HATPase_Hsp90-like 19 159 - -
Bva08g00123 212 ProSitePatterns Heat shock hsp90 proteins family signature. 30 39 IPR019805 GO:0005524|GO:0006457|GO:0051082
Bva08g00123 212 MobiDBLite consensus disorder prediction 190 212 - -
Bva08g00123 212 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 10 170 IPR036890 -
Bva08g00123 212 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 1 139 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bva08g00123 212 PANTHER HEAT SHOCK PROTEIN 90-1 1 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00123 Bva-Chr8 623365 624676 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00123 K04079 - ini:109164595 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00123 08 623365 624676 Bva08g00123 08 623365 624676 ECH