Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00117 ATGTCTCCAGTTCGAAGATTGACAATGGCAATGATGTCCAACTCCTTCTCACTCAAGCACGGACTGTCTCTTTGGTGTCCCCAAACGCCATCTCTGAATCGAGCTAACCCTTCTTTAACTTCAATCAAATTCAGAAGCTTCCAAAGATGTTACGCCGCTTTCGCTAATGAGAATCGCGAGTATGTGATCGTTGGTGGTGGAAATGCCGCCGGATATGCTGCTCGAACTTTCGTGGAGCACGGCATGGCTGATGGACGGCTTAGTATTGTGACAAAAGAGGCATATGCACCTTACGAGCGTCCAGCTTTGACAAAAGCCTATTTGTTCCCACCAGATAAGAAGCCAGCGCGCCTCCCTGGGTTCCACACCTGTGTCGGATCCGGTGGAGAGAGACAGACTCCAGAATGGTATAAAGAGAAAGGGATAGAGATGTTCTATGAAGATCCAGtagaaaatattgatattgaaaaGCAAACTTTGGTGACAAATTCGGGAAAACTGCTCAAGTATGGAACACTTATAATTGCAACAGGAGCTGCGGCCTCAAGATTTCCAGAGAAAATTGGAGGAAATCTACCTGGTGTTCACTATATCCGGGATGTTGCGGATGCTGATTCACTAGTTTCATCATTGGAAAAAGCACGGAAGGTAGTTGTTGTTGGAGGTGGTTACATTGGCATGGAGGTTGCTGCTGCAGCTGTCGGTTGGAAACTTGATACAACGATTATATTTCCAGAGGATCATCTTTTGCAAAGACTGTTCACTCCTTCTCTTGCCCGGAGATATGAAGAACTCTACCAAAAGAATGGTGTGAAGTTCTTAAAGTGTGTCTCCATTAAAAACTTGGAAGCTGGTTCTAATGGACGTGTATCTGCTGTGAAACTTGGAGACGGATCAACAGTAGAAGCAGATACGGTAATTATAGGCATTGGAGCTAAACCTGCAGTAAGTCCCTTCGAGAAGGTGGGCCTGAATGCAGATGTTGGTGGGATACAGGTGGATGGTCAATTCCGGACAAGCATCCCTGGGATCTTTGCTATTGGGGACGTAGCAGCTTTCCCATTAAagATATATAACCGAATGACACGAGTGGAACATGTGGATCATGCTCGTCGTTCAGCACAGCACTGTGTGAAAGCATTACTAAGCGCGCAAACCTACACgTATGATTATCTTCCATACTTCTACTCGAGGGTATTTGAATATGAAGGGAGCCCCAGGAAAGTATGGTGGCAGTTTTACGGGGACAACGTTGGTGATACAGttgaaattggaaattttgatCCTAAAATAGCTACCTTCTGGATTGAAGATGGTAGGCTCAAAGGAGTCCTCGTTGAAAGTGGAAGCCCCGAGGAATTTGAGCTTCTGCCTAAACTTGCCAGAAGTCAGCCTCTGGTTGATAAAGCCAAACTTCAAAACGCATCTTCAGTTGAGGAGGCCCTAGACATAGCTCGGGCATCTTTGCAGTTTGAAGCTGCAGTCTA 1487 0.4492 MSPVRRLTMAMMSNSFSLKHGLSLWCPQTPSLNRANPSLTSIKFRSFQRCYAAFANENREYVIVGGGNAAGYAARTFVEHGMADGRLSIVTKEAYAPYERPALTKAYLFPPDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMFYEDPVENIDIEKQTLVTNSGKLLKYGTLIIATGAAASRFPEKIGGNLPGVHYIRDVADADSLVSSLEKARKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEDHLLQRLFTPSLARRYEELYQKNGVKFLKCVSIKNLEAGSNGRVSAVKLGDGSTVEADTVIIGIGAKPAVSPFEKVGLNADVGGIQVDGQFRTSIPGIFAIGDVAAFPLKIYNRMTRVEHVDHARRSAQHCVKALLSAQTYTYDYLPYFYSRVFEYEGSPRKVWWQFYGDNVGDTVEIGNFDPKIATFWIEDGRLKGVLVESGSPEEFELLPKLARSQPLVDKAKLQNASSVEEALDIARASLQFEAAV 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00117 495 PANTHER MONODEHYDROASCORBATE REDUCTASE, CHLOROPLASTIC/MITOCHONDRIAL 22 494 - -
Bva08g00117 495 Gene3D - 394 481 IPR016156 GO:0016491|GO:0050660
Bva08g00117 495 PRINTS Pyridine nucleotide disulphide reductase class-I signature 60 82 - -
Bva08g00117 495 PRINTS Pyridine nucleotide disulphide reductase class-I signature 344 351 - -
Bva08g00117 495 PRINTS Pyridine nucleotide disulphide reductase class-I signature 304 318 - -
Bva08g00117 495 PRINTS Pyridine nucleotide disulphide reductase class-I signature 216 241 - -
Bva08g00117 495 PANTHER APOPTOSIS-INDUCING FACTOR 1 22 494 - -
Bva08g00117 495 Gene3D - 184 311 IPR036188 -
Bva08g00117 495 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 386 476 IPR016156 GO:0016491|GO:0050660
Bva08g00117 495 Gene3D - 62 377 IPR036188 -
Bva08g00117 495 PRINTS FAD-dependent pyridine nucleotide reductase signature 329 351 - -
Bva08g00117 495 PRINTS FAD-dependent pyridine nucleotide reductase signature 216 234 - -
Bva08g00117 495 PRINTS FAD-dependent pyridine nucleotide reductase signature 62 81 - -
Bva08g00117 495 PRINTS FAD-dependent pyridine nucleotide reductase signature 303 319 - -
Bva08g00117 495 PRINTS FAD-dependent pyridine nucleotide reductase signature 170 188 - -
Bva08g00117 495 Pfam Pyridine nucleotide-disulphide oxidoreductase 60 374 IPR023753 GO:0016491
Bva08g00117 495 SUPERFAMILY FAD/NAD(P)-binding domain 55 381 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00117 Bva-Chr8 600672 605955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00117 167 355 Acyl Lipid Metabolism Gene Families AT1G48030 27.861 9.28e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00117 K08232 - gmx:100819919 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00117 08 600672 605955 Bva08g00117 08 600672 605955 ECH