Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00115 ATGAGCAGCAACCAAGTTCAATTACTGTCTAAGATTGCCACCGGTGACGGACATGGTGAAAACTCCCCATATTTTGATGGCTGGAAAGCATACGAAAATGATCCTTTTCATCCCACCAAGAATCTCCATGGAGTTATCCAGATGGGTCTTGCTGAAAATCAGCTTTCTTTTGATGTGATTCAAGAATGGGTAATGAGTAATCCGAAGGCCTCCATTTGCACATTAGAAGGAGTACGTAATTTCAGTGACATAGCTAACTTTCAGGACTATCATGGCTTACCGGAGTTTAGAAATGCTGTGGCTAAATTCATGGCTAGAACAAGAGGAAACAGAGTGAGATTCGACCCTGACCGCATTGTTATGAGCGGTGGAGCAACAGGTGCACACGAGGTCACTGCCTTCTGTTTGGCTGATCCCGGTGATGCTTTTTTGGTCCCCACTCCTTACTATCCAGGTTTTGACCGGGATTTGAGGTGGAGAACAGGAGTACAACTTGTTCCAATTATTTGCGAAAgctcaaataatttcaaagtAACAGAGAAAGCATTGGAAGCTGCCTTTGAGAAGGCTAGAAAGGACAACATCAGAGTAAAAGGCGTGCTTATTACCAATCCATCAAACCCATTAGGGACTATAATGGACAGAGAAACGCTAAGAACTATTGTAAGGTTTGTTAATGAGAAGAGCATCCACCTGATATGTGATGAAATATATGCTGCTACTGTTTTCTCTAAACCTGACTTCACAAGCATCGCCGAGATAATAGAGGAAGACAATATTGATTGTAACCGTGACCtcatccacattgtttatagTCTTTCAAAGGATATGGGACTCCCTGGCTTCAGAgttggcatcatatattcttACAACGACGCCGTAGTGAATTGTGCTcgcaaaatgtcaagctttGGATTAGTTTCCAGTCAGACCCAACATCTCATAGCATCAATGCTATCTGATGACGAGTTTGTAGAACGATTCCTTGCAGAAAGCGCAAAGAGGCTCGCCAAAAGGTATAGGGTTTTCACTAGGGGGCTTTCCCAAGTTGGCATAAACTGCTTGAAGAGTAATGCTGGTCTGTTTTTATGGATGGATTTGCGTAGTCTTCTCAAGAGTCAGACATTTGAAGCAGAAATGGCATTGTGGCGAGTGATCATTAACCAAGTTAAGATCAATGTATCGCCTGGTTCTTCTTTTCATTGCTCCGAGCCAGGGTGGTTCAGAGTATGCAACGCCAACATGGATGATAGGGCTGTTGAAATTGCTTTGACAAGAATCCGCAACTTTGTGCTTCAAAATATGGAGGGCAAGGCTCCTGTGAAGAAACAGTGTTGGCAGAGCAACTTAAGGCTAAGCTTCTCATCCAGAATGCTCGATGATATCACGATGTCACCTCACTCCCCAATACCTCATTCACCTTTGGTTAAAGCCACAACTTG 1442 0.4154 MSSNQVQLLSKIATGDGHGENSPYFDGWKAYENDPFHPTKNLHGVIQMGLAENQLSFDVIQEWVMSNPKASICTLEGVRNFSDIANFQDYHGLPEFRNAVAKFMARTRGNRVRFDPDRIVMSGGATGAHEVTAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLVPIICESSNNFKVTEKALEAAFEKARKDNIRVKGVLITNPSNPLGTIMDRETLRTIVRFVNEKSIHLICDEIYAATVFSKPDFTSIAEIIEEDNIDCNRDLIHIVYSLSKDMGLPGFRVGIIYSYNDAVVNCARKMSSFGLVSSQTQHLIASMLSDDEFVERFLAESAKRLAKRYRVFTRGLSQVGINCLKSNAGLFLWMDLRSLLKSQTFEAEMALWRVIINQVKINVSPGSSFHCSEPGWFRVCNANMDDRAVEIALTRIRNFVLQNMEGKAPVKKQCWQSNLRLSFSSRMLDDITMSPHSPIPHSPLVKATT 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00115 480 Gene3D - 68 321 IPR015421 GO:0003824
Bva08g00115 480 CDD AAT_like 86 428 - -
Bva08g00115 480 Gene3D Aspartate Aminotransferase, domain 1 34 426 IPR015422 GO:0003824
Bva08g00115 480 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 2 442 - -
Bva08g00115 480 SUPERFAMILY PLP-dependent transferases 18 431 IPR015424 -
Bva08g00115 480 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 6 2 442 - -
Bva08g00115 480 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 272 285 IPR004838 GO:0003824|GO:0009058|GO:0030170
Bva08g00115 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 81 97 - -
Bva08g00115 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 230 253 - -
Bva08g00115 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 48 74 - -
Bva08g00115 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 298 321 - -
Bva08g00115 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 194 218 - -
Bva08g00115 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 118 138 - -
Bva08g00115 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 140 161 - -
Bva08g00115 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 266 290 - -
Bva08g00115 480 Pfam Aminotransferase class I and II 46 427 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00115 Bva-Chr8 594418 596756 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00115 K20772 - gmx:100037458 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00115 08 594418 596756 Bva08g00115 08 594418 596756 BWGD
Bva08g00115 08 594418 596756 Bva08g00115 08 594418 596756 ECH