Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00114 ATGGCAACACCTTCTTCCTTCGCTCCCTCTCCAATAACGTTAACAAGAACCACAGCTACCAATAAATCCTATACtctattttccttctcttgttCCTTTCCTCGCATAGATACCGCACGCCGGAACTTTCATCTCCGATCAATAAATTCTTCGGTGTCTACAGTTTCAGCAGCTGCAACCACCTCCATCGAAGCCGGCGTATCCCCTATCTCAGCCACTCCCTCCAAGCCTTTACCCTTTCGGGTGGGACATGGCTTTGACCTCCATCGATTAGAACCTGGTTACCCCTTAATTATCGGTGGAATTAACATACCCCACGATAGAGGTTGCGAGGCCCATTCTGATGGGGACGTACTGCTTCACTTGGAAGGATGTGCATCCTCTGCTTTTATTAAAGAAGCGGTTAAACTTATGCACGAGGCTGGTTATGAACTCGGAAATTTAGATGTTACATTGATACTTCAAAGGCCAAAACTTAGCCCGCACAAGGAGGCTATCAAGGCCAACTTGTCTGCACTGCTTGAGGTTGACCCTTCTGTGGTGAATCTCAAAGCAAAATCACACGAAAAAATTGACAGCCTGGGAGAAAATGGAAGTATAGCGGTTCACACAGTGGTTCTTTTAATGAGGAAGTA 635 0.4504 MATPSSFAPSPITLTRTTATNKSYTLFSFSCSFPRIDTARRNFHLRSINSSVSTVSAAATTSIEAGVSPISATPSKPLPFRVGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHLEGCASSAFIKEAVKLMHEAGYELGNLDVTLILQRPKLSPHKEAIKANLSALLEVDPSVVNLKAKSHEKIDSLGENGSIAVHTVVLLMRK 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00114 211 Gene3D - 75 121 IPR036571 GO:0008685|GO:0016114
Bva08g00114 211 CDD MECDP_synthase 81 208 IPR003526 GO:0008685|GO:0016114
Bva08g00114 211 Gene3D - 122 211 IPR036571 GO:0008685|GO:0016114
Bva08g00114 211 PANTHER 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE, CHLOROPLASTIC 43 121 IPR003526 GO:0008685|GO:0016114
Bva08g00114 211 PANTHER 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE 124 211 - -
Bva08g00114 211 PANTHER 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE 43 121 - -
Bva08g00114 211 PANTHER 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE, CHLOROPLASTIC 124 211 IPR003526 GO:0008685|GO:0016114
Bva08g00114 211 Pfam YgbB family 80 121 IPR003526 GO:0008685|GO:0016114
Bva08g00114 211 Pfam YgbB family 123 208 IPR003526 GO:0008685|GO:0016114
Bva08g00114 211 SUPERFAMILY IpsF-like 79 210 IPR036571 GO:0008685|GO:0016114
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00114 Bva-Chr8 590554 592214 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00114 K01770 - jre:108983878 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00114 08 590554 592214 Bva08g00114 08 590554 592214 ECH