Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00109 ATGAAGTGCCGATCTGTGGCGTGTATATGGTCCGGCACGCCTCCACCTCACAGAGTTACCGCCGCTGCTGTTTTGGGTCAACCGCCAGCGTTCTACACTGGTGGATCTGATGGCTCCATCATCTGGTGGAACCTATCAGGCAACAGTTCCTGCCCGGATGTTAAACCAGTTGGCATGTTGTGTGGTCATGCAGCACCCATCACTGATCTTGGTATTTGTAGTCCCATCACGACAGAAGAAAATGTAGGCCATGCAAACAATTTAATGGTGAAATCTACGTCAAGCAATTTTAATGCATTAATAAGCGCATGTGCGGatggttttttgtgtgtttGGAGTCAAAGCAGTCGGCATTGTCGATGCAGGAGGAAATTGCCGCCTTGGGTGGGCAGTCCATGCATGATTCGAACTTTGCCTTCAAGGGAAAGATATGTATGCATTGGATGTTCTTTCATGGACACTGCCCATTTATCTGATTACTACTCAATGGAAGGAAATGAAGGCTTAATGGATAGAGAAACGCAGCCCAGGAAGCCCCGAAAATGCACTATCGTTATTGTTGACACATATTCACTTACCATTACGCAAACCGTATTTCACGGAAATCTTTCTATTGGTTCAATGAAGTTTATGACTGTAGTTTCAGCTGATAATGATAAAGAGAGGCACTCCGTAATTCTGGTTGATTCAGTTGGTAAGCAACAAATGATTTCAATATCTACGGAGCCGCATGATAGTGGAGAAAGCTCGACGAGTTTGCATAAAGATACAACTCAGTTGGAAAATGCTCTTTGTGACGAGGGATTGAGTGGGGTGCGACAAATTATTTCAATCACGACCCACGGGAACATTGTTGCTTTCCTCTTTAAAGACCACTGcatatttagtttattgtCTAATGATACTAAAATTGGAGAGGTTTCTTTTGTGGACAATCTCTTACGTTCTGATGGGCACTCTACCCAAGCACATGTTATGGGGGGAATGTTTCTTGAAAACGATGATATGAAGAATATGCTGAATCCCCATGACTGCAGTGACTTTGTTGcagaatattttattgtgtggAACAGTAGAGGTTCTGCAATAGTCTTTAAAATGTCATATCAGAATGAAGTTTTTCAATGTGAGCCGTATTCTGAGATTCCTTCTACTAGTTGTTGGCCTGATGCgagattttctatttttttccttcaagtGTATGATTATCTGCTCCGCATTGCGTCAGTTTGCTTTCATTGTGAGGAACCTTTACTATGGAGACCCCATGTTACTATTTGGTCACTATCTCATTTTGAAGGTGAACCAGATAAATTGTACCGTCGGTGCAGAATCCTTGGAGAAGTTGTTTCTTTCACCGACTGGCTTGAGAAGCCTACTCAGCACAAAGGATCAAGTTCTCCAGAGACAAATTTAACTTCTAGTTTAATTTCGACTTCAGAAGGCATAAACGATATAGATGTCAGGAACATAAATGACTACAATGCTTACAAGGCACGGattgtttcttcttccatgATTATCTCCGAGAACCTTTTTACTCCATACGCTGTTGTATATGGTTTTCTAAGTGGGGAAAtagagtttttaaaatttgatttgtttcaaTCTCTCTGCTTTGATGATGAAAGTTCCAATTCCGAGGAAAAATCTAATGTTCGCAAACAGTATTTCTTGGGGCATACGGGCGCTATACTTTGTTTGGCAGCACATCAAATGGTGGGTAATGCCAAAGGAGGGAGTTTCAATCGGGTTTTGGTGTCTGGAAGCATGGATTGCACTGTTCGAATATGGGATCTTGACACTAGCTGTGTTCTTATGGTTATGCATCATCATGTGGCTCCAGTGCGCCAAATTATTCTTCCCCCATCTTTGACCGAGCGTCCTTGGAGTGACTGCTTTCTTTCAGTTGGAGAGGACTCGTGTGTTGCTCTAGTTTCTCTTGAGACACTGCGGGTGGAGAGAATGTTTCCTGGACATATGAACTATCCTTCAAAAGTGGTATGGGATGGAGCTAGAGGTTATATTGCCTGTCTCTGCCAAACCAATTCTGGAAGCTCTGATGCTACTGACGTATTGTACATTTGGGATGTTAAAACAGGTTCCCGTGAGCGAATCCTACGTGGGACAGCTGCACATTCCATGTTCGAACATTTTTGTAAAAGCATCAGTAAGAATTCCTTATCTGGCTCTCTGTTGAATGGAAATACATCAGTTTCTTCGTTGCTTCTTCCAATAGTTGAAGATGGAAGATTTTCCAATTCCCACTCCGGCCTATCAGAAAACTCGGTGACTGCATCAAGGTCATTGCCAAGTATTTCCAATGTAACTGAACTGAAGGCCTCCCAAACACATGCAGgtaaagaaaattctgcaatACCAAAGTCAACTGCTCTGTCGGCTCCTTGGAGTAACAGGCTTCCTGTAAAATGCTCTTGCCCATTCCCTGGGATTGTGGCTCTGAGTTTTGATCTTGCACCATTGATGCTCTCTTATCAGAAGCATGATTCCGTGGAACGTGGAGGTTACAAGCCATTAAGTAATAATTTGAAGCAGCAGGGAATTCACAAACAAAATCCCAGCTGTCACAATCCAGAAATATGTGAAATTCAAACAGATACTTTAGAGGGGCATGAATGTGTTAGGCAATTTGAAGAATACTTAATCCGATTCAGCTTGTCATTTTTACATTTGTGGGGTGTAGACAGTGAGCTTGATAATTTACTGATAAGTGACATGAAGTTGAGGAGAcctgaaaattttatagttgCTTCAGGTCTGCAAGGAGACAAAGGGTCTTTCACATTGATGTTTCCTGATCTGAGTTCTATTCTTGAGCTCTGGAAATCATCATCTGAGTTCTGTGCAATAAGGTCACTGACGATAGTATCCCTTGCCCAACGTTTGATTAGCTTGTCTCACTGTGGTTCAGCAGCCAGCAGTGCTTTGGCAGCATTCTATACTCGAAATTTCATGGAAAAAGTTCCAGATTTAGAGCCACCTTCCTTACAGCTCTTGGTGGCTTTTTGGCAAGATGAAAGTGAACATGTTCGTATGGCTGCACGCACTTTATTTCATTGTGCTGCCTCACATGCTATTCCCCTGCCTCTAGGCAAATCAAAAGCCACTGAGCCTGGCAGAGAGCACGTAGAAACTAGAATAGAAAGCATATCTCCTGACTCAGAAAAGCAAGGAATTTCCCAAGCTGAGGAATCCAATATACTTGCATGGCTACAATCATTTGAAGTGCAAGATTGGATTTCTTGTGTTGGGGGAACAAGTCAAGATGTTATGACATCTCACATTATTGTTGCTGCTGCACTAGCAGTCTGGTATCCTAGTCTTGTGAAACCCAGTCTTGCCACATTGGTTGTTCAACCATTGATAAAATTGGCTATGTCTATGAATGAGAAGTATAGCTCCACTGCTGCCGAGCTCCTTGTAGAGGGTATGGAGAGTACATGGAAGGAATGCATTGGGTCTGAGATACCTCGACTCTTTGAGGATATTTATTTCCAAATAGAGTTGAGTGGCCCATCTACTAGTTCAATTGCAGAAGTTCCAGCTGCATCAGCTACCCTTAGGAAAACTTTGGTTGAGATTCTACTTCCAAGTTTAGCCATGGCTGATATATCAGGGTTTTTGACTGTCATAGAAAGTCAAATTTGGTCTACTGCATCTGATTCGCCTGTCCATTTGGTATCACTCATGACTCTCATCAAGGTTATGCGTGGTTCTCCAAGAAGCTTGGCTCAGTACCTTGACAAGGTTGTCAACTTCATTTTACAAACTATAGATCCCAGCAATTCAGTCATGCGGAAGGCTTGCTTCCAGAGTGCAATGACTACTTTAAAAGAAGTTGTACGTGTGTATCCTATGGTTGCTGTGAATGATGCATGGACCCGATTAGCTGTTGGGGATGCATTTGGAGAGCTTAACAATGCAAGCATTAGGGTTTATGATATGCAAAGTGTGACAATGATAAAGGTTTTGAATGCAAGTGGACCCCCCGGACTTCCAAGTTTGCTTGCAGCAGCGTCAGAAACAACGTTAGCTGCTGCAATTTCAGCTTTGAGCTTTTCGCCTGATGGAGAGGGGTTGGTTGCCTTTTCTGAACATGGGCTGATGATCAGATGGTGGTCATTGGGATCTGTCTGGTGGGAGAAACTGAGCCGCAGCTTTGTTCCTGTCCAGTGCACCAAACTGATTTTTGTTCCTCCTTGGGATGGATTCTCTCCTAATTCTTCTAGATCAAGCATAATGGCCAACATCCTAGGAACTGATGGACAGTTGAGCTTCCAGGATAATGCGAGGGATTTAAGTCATGGGGACAGTTTGAAACAATTGATTCATAATCTTGATCTCTCCTATCGGCTAGAATGGATTGTTCCGCGGAAAGTACTTCTTACAAGGCATGGTCATGAATTAGGAACTTTTCAGTTGTA 4445 0.4164 MKCRSVACIWSGTPPPHRVTAAAVLGQPPAFYTGGSDGSIIWWNLSGNSSCPDVKPVGMLCGHAAPITDLGICSPITTEENVGHANNLMVKSTSSNFNALISACADGFLCVWSQSSRHCRCRRKLPPWVGSPCMIRTLPSRERYVCIGCSFMDTAHLSDYYSMEGNEGLMDRETQPRKPRKCTIVIVDTYSLTITQTVFHGNLSIGSMKFMTVVSADNDKERHSVILVDSVGKQQMISISTEPHDSGESSTSLHKDTTQLENALCDEGLSGVRQIISITTHGNIVAFLFKDHCIFSLLSNDTKIGEVSFVDNLLRSDGHSTQAHVMGGMFLENDDMKNMLNPHDCSDFVAEYFIVWNSRGSAIVFKMSYQNEVFQCEPYSEIPSTSCWPDARFSIFFLQVYDYLLRIASVCFHCEEPLLWRPHVTIWSLSHFEGEPDKLYRRCRILGEVVSFTDWLEKPTQHKGSSSPETNLTSSLISTSEGINDIDVRNINDYNAYKARIVSSSMIISENLFTPYAVVYGFLSGEIEFLKFDLFQSLCFDDESSNSEEKSNVRKQYFLGHTGAILCLAAHQMVGNAKGGSFNRVLVSGSMDCTVRIWDLDTSCVLMVMHHHVAPVRQIILPPSLTERPWSDCFLSVGEDSCVALVSLETLRVERMFPGHMNYPSKVVWDGARGYIACLCQTNSGSSDATDVLYIWDVKTGSRERILRGTAAHSMFEHFCKSISKNSLSGSLLNGNTSVSSLLLPIVEDGRFSNSHSGLSENSVTASRSLPSISNVTELKASQTHAGKENSAIPKSTALSAPWSNRLPVKCSCPFPGIVALSFDLAPLMLSYQKHDSVERGGYKPLSNNLKQQGIHKQNPSCHNPEICEIQTDTLEGHECVRQFEEYLIRFSLSFLHLWGVDSELDNLLISDMKLRRPENFIVASGLQGDKGSFTLMFPDLSSILELWKSSSEFCAIRSLTIVSLAQRLISLSHCGSAASSALAAFYTRNFMEKVPDLEPPSLQLLVAFWQDESEHVRMAARTLFHCAASHAIPLPLGKSKATEPGREHVETRIESISPDSEKQGISQAEESNILAWLQSFEVQDWISCVGGTSQDVMTSHIIVAAALAVWYPSLVKPSLATLVVQPLIKLAMSMNEKYSSTAAELLVEGMESTWKECIGSEIPRLFEDIYFQIELSGPSTSSIAEVPAASATLRKTLVEILLPSLAMADISGFLTVIESQIWSTASDSPVHLVSLMTLIKVMRGSPRSLAQYLDKVVNFILQTIDPSNSVMRKACFQSAMTTLKEVVRVYPMVAVNDAWTRLAVGDAFGELNNASIRVYDMQSVTMIKVLNASGPPGLPSLLAAASETTLAAAISALSFSPDGEGLVAFSEHGLMIRWWSLGSVWWEKLSRSFVPVQCTKLIFVPPWDGFSPNSSRSSIMANILGTDGQLSFQDNARDLSHGDSLKQLIHNLDLSYRLEWIVPRKVLLTRHGHELGTFQL 1481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00109 1481 Gene3D - 460 796 IPR015943 GO:0005515
Bva08g00109 1481 ProSitePatterns Trp-Asp (WD) repeats signature. 586 600 IPR019775 -
Bva08g00109 1481 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1481 - -
Bva08g00109 1481 SMART WD40_4 1344 1381 IPR001680 GO:0005515
Bva08g00109 1481 SMART WD40_4 5 44 IPR001680 GO:0005515
Bva08g00109 1481 SMART WD40_4 551 599 IPR001680 GO:0005515
Bva08g00109 1481 SMART WD40_4 650 697 IPR001680 GO:0005515
Bva08g00109 1481 SMART WD40_4 602 647 IPR001680 GO:0005515
Bva08g00109 1481 SMART WD40_4 53 113 IPR001680 GO:0005515
Bva08g00109 1481 SUPERFAMILY ARM repeat 978 1314 IPR016024 -
Bva08g00109 1481 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1481 - -
Bva08g00109 1481 SUPERFAMILY WD40 repeat-like 15 709 IPR036322 GO:0005515
Bva08g00109 1481 Pfam WD domain, G-beta repeat 558 599 IPR001680 GO:0005515
Bva08g00109 1481 Gene3D - 2 263 IPR015943 GO:0005515
Bva08g00109 1481 ProSiteProfiles Trp-Asp (WD) repeats profile. 583 608 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00109 K24738 - gmx:100818675 2048.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00109 08 561945 571799 Bva08g00109 08 561945 571799 ECH