Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00102 ATGGATGGAAATGGATTCTTTGGATATAGGCATTTCCAACAAGAGGAATGGCTACGAGGGTTAGCTTCTGTGGCCAACCACTTTAAGGGAAAACCCCAGGTAaGTAAAAATGCGCGAGATTGGTACAATGACTTTATCTTCCTAAAGAAAAAGGCCCTTGATGTAAACTTGGGGTGTTTGAGAGGACCAGCAGCGGAGAGGTGGAATGTGCAACCACTGAATCTAGTATGTGCAGCCACCATTGAAAGCCTAAACGAGAATTCCGCATTTGTTATGAGTGGTGATAAGGCGGCACCATTGTGGTTAAGTGCTTTTGGGCCCGACGTGCGAGGAAACTACTATTACAGAGAAGGACAAGAGGACGCAGATGACACTTATGCTCTATTGGACCAGGATTGGACAAACCTCAGAGATCGCCAATTCCCTGACAAGTTTCAGCTTCttcaaaggaaaattcaagGCATCATAGTGAAGGGCGTCCACCAATTCTCTCACAAGATTGTTTGGAAATCTGTGTCATTGTCGGGTCTTCGCCTTGCTACCTCAGACAAAATGGGAGAGCCTCTGTGCTTGGAGATGGATTCCTCCGTTTCAAAGATTGTCACCAAAAAATACATCTGCACacaagatgatgatgattctGCTTGTCTTGACAATCCACAAAGccatcaatttaataaataccTGGTTCACTGCCATCTGCCATGTTATTggta 716 0.419 MDGNGFFGYRHFQQEEWLRGLASVANHFKGKPQVSKNARDWYNDFIFLKKKALDVNLGCLRGPAAERWNVQPLNLVCAATIESLNENSAFVMSGDKAAPLWLSAFGPDVRGNYYYREGQEDADDTYALLDQDWTNLRDRQFPDKFQLLQRKIQGIIVKGVHQFSHKIVWKSVSLSGLRLATSDKMGEPLCLEMDSSVSKIVTKKYICTQDDDDSACLDNPQSHQFNKYLVHCHLPCYW 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00102 238 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS HYDROLASE 164 226 - -
Bva08g00102 238 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 110 153 - -
Bva08g00102 238 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS HYDROLASE 110 153 - -
Bva08g00102 238 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 62 109 - -
Bva08g00102 238 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS HYDROLASE 2 35 - -
Bva08g00102 238 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS HYDROLASE 62 109 - -
Bva08g00102 238 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 2 35 - -
Bva08g00102 238 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 164 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00102 Bva-Chr8 520669 521876 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00102 2 154 Glycoside Hydrolase AT1G13130 21.304 2.10e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00102 K01179 - gmx:100811735 142.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00102 08 520669 521876 Bva08g00102 08 520669 521876 ECH