Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00085 ATGGTGCAAAGGCAGGCAGCTTGGAGAAGAGTTGTAGGTTTAGCTATATCAGCTGGGATCAGCACGCCAGGGATGTGTGCTAGTCTTGCTTATTTTGATACATACAGGAGAGCAAGGCTTCCAGCCAACCTTGTTCAGGCTCAGAGGGATTTTTTCGGGGCTCATACATATGAGCGAATTGATCACCCTGGGGCTTTCCACACCGAATGGGCAAAACTTGCTCGGAAGAGTGGAGTTGGTGCTTTGAATTG 251 0.49 MVQRQAAWRRVVGLAISAGISTPGMCASLAYFDTYRRARLPANLVQAQRDFFGAHTYERIDHPGAFHTEWAKLARKSGVGALN 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00085 83 SMART 6PGD_2 1 71 IPR006114 GO:0004616|GO:0006098
Bva08g00085 83 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE 1 79 IPR006183 GO:0004616
Bva08g00085 83 Pfam 6-phosphogluconate dehydrogenase, C-terminal domain 3 70 IPR006114 GO:0004616|GO:0006098
Bva08g00085 83 Gene3D - 1 38 IPR013328 GO:0016491
Bva08g00085 83 Gene3D - 40 72 - -
Bva08g00085 83 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING 3, CHLOROPLASTIC 1 79 - -
Bva08g00085 83 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 3 72 IPR008927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00085 Bva-Chr8 437460 437711 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00085 K00033 - gmx:100803740 159.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00085 08 437460 437711 Bva08g00085 08 437460 437711 ECH