Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00080 ATGGCCTCCAAGCGGATTTTAAAGGAGCTCAAAGATCTCCAGAAAGATCCTCCTACTTCTTGCAGTGCTGGCCCAGTTGCTGAAGACATGTTTCATTGGCAAGCTACAATTATGGGTCCTCCTGACAGTCCATATGCAGGAGGAGTATTTCTCGTAACCATCCATTTTCCTCCAGATTACCCATTTAAGCCACCCAAGGTTGCTTTTAGGACAAAGGTGTTTCACCCCAATATTAACAGCAATGGGAGCATTTGTCTTGACATATTGAAGGAGCAATGGAGCCCTGCACTAACTATATCTAAGGTTTTGCTCTCCATCTGCTCCCTCTTAACAGACCCTAATCCTGATGATCCTTTGGTACCTGAAATATCCCACATGTATAAGACTGATAGGAGCAAATACGAATCAACAGCAAGAAGCTGGACCCAAAAATATGCTATGGCCTTCGCCGGCAATACAATATTCGTTCTTCCGCTGTTAAATACATTGGTTGTCCTCCGACACTGCCCGCAAACTCCTTTCTCGTCGGTAAAGTACGTACATTCAAGACCTAAGCCATG 560 0.4464 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEISHMYKTDRSKYESTARSWTQKYAMAFAGNTIFVLPLLNTLVVLRHCPQTPFSSVKYVHSRPKP 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00080 186 Pfam Ubiquitin-conjugating enzyme 5 141 IPR000608 -
Bva08g00080 186 Gene3D Ubiquitin Conjugating Enzyme 1 149 IPR016135 -
Bva08g00080 186 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 74 89 IPR023313 -
Bva08g00080 186 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 147 IPR000608 -
Bva08g00080 186 PANTHER BNAA01G32320D PROTEIN 3 151 - -
Bva08g00080 186 SUPERFAMILY UBC-like 2 148 IPR016135 -
Bva08g00080 186 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 3 151 - -
Bva08g00080 186 SMART ubc_7 4 147 - -
Bva08g00080 186 CDD UBCc 3 142 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00080 Bva-Chr8 413534 416411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00080 2 114 Miscellaneous Gene Families AT3G17000 36.975 3.46e-20 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00080 K06689 - nnu:104600303 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00080 08 413534 416411 Bva08g00080 08 413534 416411 ECH