Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00074 ATGGATGAAGAAGTGGTTGGTGATGCAACGCCATTGGAGGTGGCTGAGGGTGCGGAACATCAGAGCATAGAGGATGAGTATTCACTCAGACCTGAAAGCTGCAAAATGTTGAAACCACAAGATGTTCTTATACCTTCTGAGGCTGACTACTCCCAGATCCCACCTCAGGAATATTGTGATACTCGACAGGGTAAAAATGTAATCGACACAATTGGCCATGTAACTACATCTGAAGATCCACGTCAAAGCATATTATTGGATGATGATGGTATCATGGAATTAATTGTGAGGTACAATGGTTCAACCTTAGATATTGGTACGTCAAACAATCGAGAAAAAATGCATAACTGGCAGAGCCACTGGCGGCATCTTCATCAACTAGCTGGTGATACCAGATGCAGAAACCTTGTTCAGGCTACTTCTAGTGGCTGGGAGGGTATTGGGTCCACATCTTTCCCAGAGTTATTACCTAAAAAATCACTCAGTGATGATCAGAGCAATATCATGCAACACTTGACAAATGCTGAAAGTAAAGGGAGTGCAGGCGATGTTCATGGAGGAATACGAACGAAAATGATATCCAAGTCAGGATTTTCTGAGTATTTTGTTAAGAATACATTGAAGAGTAAGGGATGGGTATGTAAAGGCCCAACCTCTGATGGCTCCCGTGTTGAGCCTAGAGACCAGAATCAGATAAAGGCTGGCATTGGTACTCAGGTGGATTCCAACGTGTCACTGAGCTTTGGTTCCATACCGCCATATTCCTCTTCCTCTAATACTGATGCGCCAAGACTTGGGGGGTCTGACTGTGATGGTGTGACTTTGAGAGAATGGTTGAAACCCGGGTGCAATAAAGCAAGCAAAGTTGAacgcttatatatatataaaaagattgTGGATCTGGTGGATAGCTCACACTCTCAGGGAGTTTCCTTGTACAACCTAAGCCCATCTTACATTAAATTGATCCCGTCAAACCAGGTTATGTACCTTGGTTTACCTATTCAGAAACAGATGTTAGATAAAGTTGTAAACTTTGAAGTTCTTCACTTAGATAATTCTCTTTGTAGAAAAAGGCCATCAGAGCAGGTGACAATTCTATCTCAtgatattttgtcaaagaaacacaaattcaatgaaaatgCGAGAGTTGCAGAGGTTTGCAATCAGTTTCTTCCAAGATCCGATTTGTATCTTCGTCCTGATAGTGATAGGAATGTCAATGCGATTGGATCACAAGATTATTACAATGAATCTGTGGAGGATATCCAAATTTCTGGGCATGGTATTCAGAGAATGTCCTGCTTCCCTCGTATATCTAATGCAAGCTTGTTGCAGTTGACATCTGTAAGTGCTAGAATGGAAGATGAGTGGTACACAAGTCCTGAGGGAGGTTGTACAACATCATCAAATATCTACTCTCTGGGCGTCCTTCTTTTCGAGTTACTTGGCCGTTTTGACTCTGAAAGAGCACATATTGCGGCAATGTCAGATCTTCATCATAGGATTCTTCCTCCTGTTTTCCTGTCAGAGAATATTAAAGAAGCTGGATTTTGTCTTTGGCTTCTGCATCCTGAACCATCTTCACGTCCAACAACAAGGGAAATCCTACAATCAGAAGTGATTAGTGGATTGCAGGAGGTGTACAGTGAGGAATTGTCGTTAAGTATTGACCAAGATCATGCAGAATCAGAACTATTATTACATTTCCTCCTCTCGTTACAAGAGCAGAAGCAGAAGGATGCCTCCAAATTAGTGGAAGAAATTAGATGCTTGGAATCAGATATTGAAGAGGTGGAGAGAAGGCATGACGCAAAAAAATCCTTAGTTTCCTCTGCTTTGCAGAATGAGAGTTCATCTCCGAACAAAGAAACTTTGAGGTCATCCCCAATCTCTAATGCAAATGAACTGAGATTGATGAGAAATATATGCCAGCTTGAAAGTGCTTACTTTTCAATGAGATCCAAAATTCAGCTTCCTGAAACAGGTTCTGTAACTCACTCAGATATAGACGTATTGCGAAATCGTGATAAGTGGTATTTGGCTCACAAAGATGAGGAAAAACAAAGTGCAACAGATTCATTAGGAATCTTCTTTGATAGTTTGTGCAAGTATGCTCGTTATAGCAAGTTTGAAGTGCGGGGTGTACTAAGAAATGCAGATTTTAACTATCCTGCAAATGTAATATTCTCTCTGAGCTTTGATCGAGATGAGGACTACTTTGCTACTGCTGGggtatcaaagaaaataaagatttttgaGTTTGATGCACTTCTCAATGACTCTGTTGATATCCATTATCCAGTTGTTGAAATGTCAAACAAATCAAAGCTCAGCTGTGTTTGCTGGAATAACTATATCAAGAACTATCTTGCCTCCACGGATTATGATGGTGTAGTTAAGTTATGGGATGCTAGCACGGGCCAAGGATTTTCTCAATTCACTGGACATGAAAAGAGGGCTTGGTCTGTTGACTTCTCTCTGGTATACCCTACAAAATTTGCCAGTGGAAGTGATGATTGTTCTGTCAAGCTCTGGAGCATCAATGAGAAAAACTGTTTAGATACAATCAGAAATGTTGCTAATGTTTGCTGTGTTCAATTCTCTGCTCATTCCACTCATTTGTTGGCCTTTGGGTCTGCGGATTGCACTACTTATTGCTATGATCTTCGTAATGTTAGAGCTCCCTGGTGCGTGTTGGTTGGACATAAAAAAGCTGTTAGTTATGTCAAATTCTTAGACTCTCAAACTCTGGTTTCTGCATCTACTGATAACACATTAAAGATTTGGGATCTCAATAAAACTTCTTCAGCGGGTCCATCCACTAGTGCGTGCAGCTTAACCCTCTCAGGACATACTAATGAGAAGAATTTTGTGGGCTTATCAGTTGCTGATGGATATATAGCATGTGGTTCAGAAACAAATGAGGTTTATGCCTACTACAGATCTCTTCCCATGCCAATCACCTCGCGCAAGTTTGGGTCCATTGATCCCATCTCTGGGAAGGAGACTGATGACGACAATGGACAATTTGTTTCAAGTGTGTGCTGGAGAAGGAAATCAGAGTCCGTTATTGCTGCGAACTCAAGTGGGTGGATAAAAGTGTTACAGATGGTTTA 3119 0.4033 MDEEVVGDATPLEVAEGAEHQSIEDEYSLRPESCKMLKPQDVLIPSEADYSQIPPQEYCDTRQGKNVIDTIGHVTTSEDPRQSILLDDDGIMELIVRYNGSTLDIGTSNNREKMHNWQSHWRHLHQLAGDTRCRNLVQATSSGWEGIGSTSFPELLPKKSLSDDQSNIMQHLTNAESKGSAGDVHGGIRTKMISKSGFSEYFVKNTLKSKGWVCKGPTSDGSRVEPRDQNQIKAGIGTQVDSNVSLSFGSIPPYSSSSNTDAPRLGGSDCDGVTLREWLKPGCNKASKVERLYIYKKIVDLVDSSHSQGVSLYNLSPSYIKLIPSNQVMYLGLPIQKQMLDKVVNFEVLHLDNSLCRKRPSEQVTILSHDILSKKHKFNENARVAEVCNQFLPRSDLYLRPDSDRNVNAIGSQDYYNESVEDIQISGHGIQRMSCFPRISNASLLQLTSVSARMEDEWYTSPEGGCTTSSNIYSLGVLLFELLGRFDSERAHIAAMSDLHHRILPPVFLSENIKEAGFCLWLLHPEPSSRPTTREILQSEVISGLQEVYSEELSLSIDQDHAESELLLHFLLSLQEQKQKDASKLVEEIRCLESDIEEVERRHDAKKSLVSSALQNESSSPNKETLRSSPISNANELRLMRNICQLESAYFSMRSKIQLPETGSVTHSDIDVLRNRDKWYLAHKDEEKQSATDSLGIFFDSLCKYARYSKFEVRGVLRNADFNYPANVIFSLSFDRDEDYFATAGVSKKIKIFEFDALLNDSVDIHYPVVEMSNKSKLSCVCWNNYIKNYLASTDYDGVVKLWDASTGQGFSQFTGHEKRAWSVDFSLVYPTKFASGSDDCSVKLWSINEKNCLDTIRNVANVCCVQFSAHSTHLLAFGSADCTTYCYDLRNVRAPWCVLVGHKKAVSYVKFLDSQTLVSASTDNTLKIWDLNKTSSAGPSTSACSLTLSGHTNEKNFVGLSVADGYIACGSETNEVYAYYRSLPMPITSRKFGSIDPISGKETDDDNGQFVSSVCWRRKSESVIAANSSGWIKVLQMV 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00074 1039 ProSiteProfiles Trp-Asp (WD) repeats profile. 771 813 IPR001680 GO:0005515
Bva08g00074 1039 PRINTS G protein beta WD-40 repeat signature 791 805 IPR020472 -
Bva08g00074 1039 PRINTS G protein beta WD-40 repeat signature 834 848 IPR020472 -
Bva08g00074 1039 PRINTS G protein beta WD-40 repeat signature 918 932 IPR020472 -
Bva08g00074 1039 MobiDBLite consensus disorder prediction 607 630 - -
Bva08g00074 1039 Pfam WD domain, G-beta repeat 899 931 IPR001680 GO:0005515
Bva08g00074 1039 Pfam WD domain, G-beta repeat 811 847 IPR001680 GO:0005515
Bva08g00074 1039 ProSiteProfiles Trp-Asp (WD) repeats profile. 900 940 IPR001680 GO:0005515
Bva08g00074 1039 Coils Coil 575 609 - -
Bva08g00074 1039 ProSitePatterns Trp-Asp (WD) repeats signature. 791 805 IPR019775 -
Bva08g00074 1039 Gene3D Transferase(Phosphotransferase) domain 1 270 552 - -
Bva08g00074 1039 PANTHER PROTEIN SPA1-RELATED 2 1 1039 - -
Bva08g00074 1039 MobiDBLite consensus disorder prediction 609 630 - -
Bva08g00074 1039 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 900 933 - -
Bva08g00074 1039 ProSiteProfiles Trp-Asp (WD) repeats profile. 814 856 IPR001680 GO:0005515
Bva08g00074 1039 SUPERFAMILY Protein kinase-like (PK-like) 270 550 IPR011009 -
Bva08g00074 1039 MobiDBLite consensus disorder prediction 1 26 - -
Bva08g00074 1039 ProSitePatterns Trp-Asp (WD) repeats signature. 918 932 IPR019775 -
Bva08g00074 1039 SUPERFAMILY WD40 repeat-like 725 1036 IPR036322 GO:0005515
Bva08g00074 1039 SMART WD40_4 850 889 IPR001680 GO:0005515
Bva08g00074 1039 SMART WD40_4 765 804 IPR001680 GO:0005515
Bva08g00074 1039 SMART WD40_4 893 931 IPR001680 GO:0005515
Bva08g00074 1039 SMART WD40_4 807 847 IPR001680 GO:0005515
Bva08g00074 1039 SMART WD40_4 942 981 IPR001680 GO:0005515
Bva08g00074 1039 SMART WD40_4 710 754 IPR001680 GO:0005515
Bva08g00074 1039 PANTHER PROTEIN SPA1-RELATED 2 1 1039 IPR044630 GO:0009640
Bva08g00074 1039 Gene3D - 698 1039 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00074 Bva-Chr8 383905 392691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00074 834 980 Miscellaneous Gene Families AT5G08390 28.859 1.04e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00074 K16240 - gmx:100776980 1353.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00074 08 383905 392691 Bva08g00074 08 383905 392691 BWGD
Bva08g00074 08 383905 392691 Bva08g00074 08 383905 392691 ECH